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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182078579
OHGA01001099
345141
Verrucomicrobiota
TTG
Gln
>WENV182078614
OHGA01002091
82054
Verrucomicrobiota
GTA
Tyr
>WENV182078609
OHGA01001907
46246
Verrucomicrobiota
TGA
Ser
>WENV182078726
OHGA01013544
97755
Verrucomicrobiota
TAG
Leu
>WENV182078619
OHGA01002419
344841
Verrucomicrobiota
CAC
Val
>WENV182078561
OHGA01000755
60880
Verrucomicrobiota
CAG
Leu
>WENV182078684
OHGA01007194
345123
Verrucomicrobiota
TGT
Thr
>WENV182078739
OHGA01016067
7274
Verrucomicrobiota
CGA
Ser
>WENV182078720
OHGA01012381
246260
Verrucomicrobiota
>WENV182078810
OHGA01033058
246728
Verrucomicrobiota
GAA
Phe
>WENV182078808
OHGA01032527
345124
Verrucomicrobiota
GTT
Asn
>WENV182078811
OHGA01033058
154693
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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