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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182079387
OHGG01001447
235102
Bacteroidota
CGT
Thr
>WENV182079657
OHGG01007415
146761
Bacteroidota
GAT
Ile
>WENV182079806
OHGG01018596
243025
Bacteroidota
CAT
Met
>WENV182079065
OHGG01000003
415410
Bacteroidota
TTG
Gln
>WENV182079205
OHGG01000350
415410
Bacteroidota
TTG
Gln
>WENV182079070
OHGG01000004
145504
Bacteroidota
TGT
Thr
>WENV182079271
OHGG01000704
338124
Bacteroidota
CCG
Arg
>WENV182079319
OHGG01000992
126641
Bacteroidota
TAC
Val
>WENV182079318
OHGG01000988
338132
Bacteroidota
GCA
Cys
>WENV182079123
OHGG01000048
280660
Bacteroidota
CCA
Trp
>WENV182079093
OHGG01000015
301449
Bacteroidota
CGG
Pro
>WENV182079245
OHGG01000565
144656
Bacteroidota
GTG
His
>WENV182079078
OHGG01000006
80607
Bacteroidota
GTA
Tyr
>WENV182079203
OHGG01000339
80607
Bacteroidota
GTA
Tyr
>WENV182079231
OHGG01000445
52358
Bacteroidota
TGA
Ser
>WENV182079233
OHGG01000445
52358
Bacteroidota
TGA
Ser
>WENV182079234
OHGG01000446
52358
Bacteroidota
TGA
Ser
>WENV182079406
OHGG01001691
52358
Bacteroidota
TGA
Ser
>WENV182079711
OHGG01010165
154643
Bacteroidota
CAT
Met
>WENV182079204
OHGG01000340
144590
Bacteroidota
GTT
Asn
>WENV182079230
OHGG01000442
95559
Bacteroidota
TAG
Leu
>WENV182079285
OHGG01000752
419272
Bacteroidota
CTG
Gln
>WENV182079519
OHGG01003470
144655
Bacteroidota
GGC
Ala
>WENV182079638
OHGG01006867
338165
Bacteroidota
GGT
Thr
>WENV182079124
OHGG01000050
132360
Bacteroidota
GGG
Pro
>WENV182079157
OHGG01000125
425638
Bacteroidota
CTG
Gln
>WENV182079235
OHGG01000460
425638
Bacteroidota
CTG
Gln
>WENV182079326
OHGG01001030
353927
Bacteroidota
TTC
Glu
>WENV182079465
OHGG01002409
414426
Bacteroidota
CTG
Gln
>WENV182079314
OHGG01000984
16224
Bacteroidota
GGA
Ser
>WENV182079348
OHGG01001156
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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