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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182081708
OHGK01002723
119661
Verrucomicrobiota
CAA
Leu
>WENV182081372
OHGK01000360
155256
Verrucomicrobiota
TCT
Arg
>WENV182081663
OHGK01002154
246701
Verrucomicrobiota
TTT
Lys
>WENV182081630
OHGK01001779
345141
Verrucomicrobiota
TTG
Gln
>WENV182081374
OHGK01000368
345133
Verrucomicrobiota
GAC
Val
>WENV182081220
OHGK01000018
82054
Verrucomicrobiota
GTA
Tyr
>WENV182081590
OHGK01001506
246677
Verrucomicrobiota
CTT
Lys
>WENV182081355
OHGK01000291
155264
Verrucomicrobiota
GGG
Pro
>WENV182081445
OHGK01000652
344845
Verrucomicrobiota
CTG
Gln
>WENV182081301
OHGK01000172
128202
Verrucomicrobiota
GTC
Asp
>WENV182081328
OHGK01000231
128202
Verrucomicrobiota
GTC
Asp
>WENV182081492
OHGK01000920
414625
Verrucomicrobiota
CCC
Gly
>WENV182081501
OHGK01000976
46246
Verrucomicrobiota
TGA
Ser
>WENV182081438
OHGK01000620
97755
Verrucomicrobiota
TAG
Leu
>WENV182081281
OHGK01000135
246700
Verrucomicrobiota
TTC
Glu
>WENV182081235
OHGK01000044
246687
Verrucomicrobiota
CGC
Ala
>WENV182081493
OHGK01000920
419909
Verrucomicrobiota
TCC
Gly
>WENV182081513
OHGK01001097
344841
Verrucomicrobiota
CAC
Val
>WENV182081439
OHGK01000629
82056
Verrucomicrobiota
TAA
Leu
>WENV182081589
OHGK01001506
344842
Verrucomicrobiota
CGT
Thr
>WENV182081236
OHGK01000045
170105
Verrucomicrobiota
CAT
Met
>WENV182081375
OHGK01000369
345110
Verrucomicrobiota
CCT
Arg
>WENV182081335
OHGK01000261
155268
Verrucomicrobiota
CGG
Pro
>WENV182081703
OHGK01002673
7256
Verrucomicrobiota
GCT
Ser
>WENV182081678
OHGK01002362
345115
Verrucomicrobiota
CAT
Met
>WENV182081219
OHGK01000018
345124
Verrucomicrobiota
GTT
Asn
>WENV182081624
OHGK01001711
368497
Verrucomicrobiota
GCC
Gly
>WENV182081311
OHGK01000190
345142
Verrucomicrobiota
CCG
Arg
>WENV182081283
OHGK01000135
246709
Verrucomicrobiota
CAT
Met
>WENV182081293
OHGK01000160
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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