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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182083929
OHGQ01000019
235097
Bacteroidota
TTT
Lys
>WENV182083968
OHGQ01000040
235097
Bacteroidota
TTT
Lys
>WENV182084087
OHGQ01000183
95987
Bacteroidota
CAA
Leu
>WENV182084162
OHGQ01000426
339412
Bacteroidota
GGT
Thr
>WENV182084327
OHGQ01002730
235102
Bacteroidota
CGT
Thr
>WENV182084443
OHGQ01005882
237796
Bacteroidota
CGT
Thr
>WENV182084265
OHGQ01001563
243025
Bacteroidota
CAT
Met
>WENV182084693
OHGQ01036297
17323
Bacteroidota
GGA
Ser
>WENV182084760
OHGQ01051508
338486
Bacteroidota
CAT
Met
>WENV182084010
OHGQ01000070
413663
Bacteroidota
CTG
Gln
>WENV182084044
OHGQ01000104
415410
Bacteroidota
TTG
Gln
>WENV182084069
OHGQ01000136
136244
Bacteroidota
TAC
Val
>WENV182084163
OHGQ01000426
237797
Bacteroidota
CCA
Trp
>WENV182084679
OHGQ01032809
59689
Bacteroidota
CAG
Leu
>WENV182083933
OHGQ01000022
412479
Bacteroidota
TTG
Gln
>WENV182083909
OHGQ01000011
147147
Bacteroidota
GTG
His
>WENV182083905
OHGQ01000005
338124
Bacteroidota
CCG
Arg
>WENV182084570
OHGQ01016778
146800
Bacteroidota
>WENV182084689
OHGQ01035442
126641
Bacteroidota
TAC
Val
>WENV182084015
OHGQ01000072
338132
Bacteroidota
GCA
Cys
>WENV182084488
OHGQ01008133
45423
Bacteroidota
TGA
Ser
>WENV182083934
OHGQ01000022
37076
Bacteroidota
TAA
Leu
>WENV182084742
OHGQ01048450
58714
Bacteroidota
CAA
Leu
>WENV182084475
OHGQ01007500
251266
Bacteroidota
CTT
Lys
>WENV182083965
OHGQ01000037
144656
Bacteroidota
GTG
His
>WENV182083998
OHGQ01000061
235207
Bacteroidota
CAT
Met
>WENV182084762
OHGQ01052968
144659
Bacteroidota
GTG
His
>WENV182084325
OHGQ01002653
80607
Bacteroidota
GTA
Tyr
>WENV182084468
OHGQ01007011
412235
Bacteroidota
>WENV182084099
OHGQ01000205
344769
Bacteroidota
CTC
Glu
>WENV182084169
OHGQ01000474
52358
Bacteroidota
TGA
Ser
>WENV182084479
OHGQ01007904
154643
Bacteroidota
CAT
Met
>WENV182084550
OHGQ01013719
175704
Bacteroidota
TGC
Ala
>WENV182084070
OHGQ01000139
144590
Bacteroidota
GTT
Asn
>WENV182084096
OHGQ01000199
95559
Bacteroidota
TAG
Leu
>WENV182083950
OHGQ01000030
419272
Bacteroidota
CTG
Gln
>WENV182084127
OHGQ01000296
144655
Bacteroidota
GGC
Ala
>WENV182084633
OHGQ01025181
95875
Bacteroidota
TAG
Leu
>WENV182084744
OHGQ01048872
150485
Bacteroidota
GTT
Asn
>WENV182084161
OHGQ01000426
95986
Bacteroidota
GTA
Tyr
>WENV182084067
OHGQ01000131
196394
Bacteroidota
GTC
Asp
>WENV182083952
OHGQ01000030
132360
Bacteroidota
GGG
Pro
>WENV182084593
OHGQ01018600
425638
Bacteroidota
CTG
Gln
>WENV182084406
OHGQ01004893
353927
Bacteroidota
TTC
Glu
>WENV182084473
OHGQ01007352
414426
Bacteroidota
CTG
Gln
>WENV182084757
OHGQ01050958
59498
Bacteroidota
GAG
Leu
>WENV182083966
OHGQ01000037
16224
Bacteroidota
GGA
Ser
>WENV182083951
OHGQ01000030
16220
Bacteroidota
GGA
Ser
>WENV182084478
OHGQ01007861
127023
Bacteroidota
GGG
Pro
>WENV182083897
OHGQ01000003
338125
Bacteroidota
CCT
Arg
>WENV182084609
OHGQ01020493
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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