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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182096180
OHHN01000024
235102
Bacteroidota
CGT
Thr
>WENV182096432
OHHN01001380
144657
Bacteroidota
CGG
Pro
>WENV182096378
OHHN01000753
243025
Bacteroidota
CAT
Met
>WENV182096397
OHHN01000865
338155
Bacteroidota
CTC
Glu
>WENV182096315
OHHN01000382
343138
Bacteroidota
CCT
Arg
>WENV182096425
OHHN01001279
58715
Bacteroidota
GAG
Leu
>WENV182096527
OHHN01004280
95618
Bacteroidota
TAG
Leu
>WENV182096413
OHHN01001170
338486
Bacteroidota
CAT
Met
>WENV182096448
OHHN01001693
338486
Bacteroidota
CAT
Met
>WENV182096259
OHHN01000160
415410
Bacteroidota
TTG
Gln
>WENV182096424
OHHN01001279
59689
Bacteroidota
CAG
Leu
>WENV182096641
OHHN01016848
341950
Bacteroidota
>WENV182096189
OHHN01000036
338124
Bacteroidota
CCG
Arg
>WENV182096386
OHHN01000802
235203
Bacteroidota
TTT
Lys
>WENV182096230
OHHN01000105
238121
Bacteroidota
CTT
Lys
>WENV182096299
OHHN01000329
126641
Bacteroidota
TAC
Val
>WENV182096331
OHHN01000463
126641
Bacteroidota
TAC
Val
>WENV182096256
OHHN01000156
338132
Bacteroidota
GCA
Cys
>WENV182096557
OHHN01008148
144688
Bacteroidota
CAT
Met
>WENV182096231
OHHN01000105
45423
Bacteroidota
TGA
Ser
>WENV182096253
OHHN01000144
58714
Bacteroidota
CAA
Leu
>WENV182096364
OHHN01000657
280660
Bacteroidota
CCA
Trp
>WENV182096383
OHHN01000784
144933
Bacteroidota
TCT
Arg
>WENV182096243
OHHN01000125
144656
Bacteroidota
GTG
His
>WENV182096263
OHHN01000175
235207
Bacteroidota
CAT
Met
>WENV182096324
OHHN01000413
144659
Bacteroidota
GTG
His
>WENV182096433
OHHN01001380
235180
Bacteroidota
CCA
Trp
>WENV182096399
OHHN01000903
144596
Bacteroidota
GGC
Ala
>WENV182096265
OHHN01000194
80607
Bacteroidota
GTA
Tyr
>WENV182096408
OHHN01001065
80607
Bacteroidota
GTA
Tyr
>WENV182096426
OHHN01001282
80607
Bacteroidota
GTA
Tyr
>WENV182096404
OHHN01000992
80614
Bacteroidota
>WENV182096363
OHHN01000652
154643
Bacteroidota
CAT
Met
>WENV182096174
OHHN01000014
95559
Bacteroidota
TAG
Leu
>WENV182096190
OHHN01000037
419272
Bacteroidota
CTG
Gln
>WENV182096172
OHHN01000011
144655
Bacteroidota
GGC
Ala
>WENV182096542
OHHN01005923
338164
Bacteroidota
TTC
Glu
>WENV182096441
OHHN01001523
95875
Bacteroidota
TAG
Leu
>WENV182096357
OHHN01000601
240012
Bacteroidota
CCC
Gly
>WENV182096393
OHHN01000848
147439
Bacteroidota
TCT
Arg
>WENV182096414
OHHN01001171
411550
Bacteroidota
CTG
Gln
>WENV182096232
OHHN01000105
50727
Bacteroidota
TGA
Ser
>WENV182096241
OHHN01000123
50727
Bacteroidota
TGA
Ser
>WENV182096270
OHHN01000232
50727
Bacteroidota
TGA
Ser
>WENV182096403
OHHN01000976
50727
Bacteroidota
TGA
Ser
>WENV182096191
OHHN01000037
132360
Bacteroidota
GGG
Pro
>WENV182096165
OHHN01000009
425638
Bacteroidota
CTG
Gln
>WENV182096177
OHHN01000021
425638
Bacteroidota
CTG
Gln
>WENV182096248
OHHN01000139
425638
Bacteroidota
CTG
Gln
>WENV182096339
OHHN01000487
239647
Bacteroidota
TTT
Lys
>WENV182096416
OHHN01001190
239647
Bacteroidota
TTT
Lys
>WENV182096303
OHHN01000340
19317
Bacteroidota
GGA
Ser
>WENV182096245
OHHN01000129
353927
Bacteroidota
TTC
Glu
>WENV182096390
OHHN01000834
185921
Bacteroidota
GTC
Asp
>WENV182096298
OHHN01000328
23696
Bacteroidota
GCT
Ser
>WENV182096277
OHHN01000255
414426
Bacteroidota
CTG
Gln
>WENV182096226
OHHN01000098
16224
Bacteroidota
GGA
Ser
>WENV182096201
OHHN01000048
16220
Bacteroidota
GGA
Ser
>WENV182096182
OHHN01000027
338125
Bacteroidota
CCT
Arg
>WENV182096605
OHHN01012412
338125
Bacteroidota
CCT
Arg
>WENV182096423
OHHN01001279
235129
Bacteroidota
GCC
Gly
>WENV182096173
OHHN01000013
411629
Bacteroidota
TTG
Gln
>WENV182096361
OHHN01000627
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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