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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182098548
OHHQ01002002
24650
Bacillota
TAA
Leu
>WENV182098706
OHHQ01006153
158247
Bacillota
>WENV182098729
OHHQ01006928
154063
Bacillota
CGG
Pro
>WENV182098806
OHHQ01011766
235154
Bacillota
GTT
Asn
>WENV182098746
OHHQ01007845
246023
Bacillota
TGC
Ala
>WENV182098913
OHHQ01026400
238910
Bacillota
CTT
Lys
>WENV182098974
OHHQ01041349
235150
Bacillota
TGC
Ala
>WENV182098979
OHHQ01043197
235137
Bacillota
TGC
Ala
>WENV182098749
OHHQ01007969
341763
Bacillota
CTC
Glu
>WENV182098265
OHHQ01000062
429429
Bacillota
CCA
Trp
>WENV182098981
OHHQ01044863
429429
Bacillota
CCA
Trp
>WENV182098804
OHHQ01011758
313454
Bacillota
GAA
Phe
>WENV182098709
OHHQ01006194
235079
Bacillota
GAA
Phe
>WENV182098845
OHHQ01015703
37269
Bacillota
TGA
Ser
>WENV182098905
OHHQ01025572
155089
Bacillota
CAT
Met
>WENV182098499
OHHQ01001253
413152
Bacillota
TCC
Gly
>WENV182098745
OHHQ01007845
201704
Bacillota
GAT
Ile
>WENV182098684
OHHQ01005461
144610
Bacillota
GTG
His
>WENV182098846
OHHQ01015703
10680
Bacillota
GGA
Ser
>WENV182098859
OHHQ01017571
185292
Bacillota
ACG
Arg
>WENV182098231
OHHQ01000024
419639
Bacillota
GCA
Cys
>WENV182098362
OHHQ01000304
235127
Bacillota
TTT
Lys
>WENV182098708
OHHQ01006194
157838
Bacillota
GTC
Asp
>WENV182098209
OHHQ01000006
238974
Bacillota
GAA
Phe
>WENV182098305
OHHQ01000120
277200
Bacillota
GGC
Ala
>WENV182098542
OHHQ01001913
344240
Bacillota
GCC
Gly
>WENV182098850
OHHQ01016412
344240
Bacillota
GCC
Gly
>WENV182098228
OHHQ01000024
152497
Bacillota
GTC
Asp
>WENV182098428
OHHQ01000592
152497
Bacillota
GTC
Asp
>WENV182098445
OHHQ01000721
196632
Bacillota
GTC
Asp
>WENV182098280
OHHQ01000073
343021
Bacillota
CAT
Met
>WENV182098292
OHHQ01000098
152018
Bacillota
CCT
Arg
>WENV182098866
OHHQ01018874
119513
Bacillota
CAA
Leu
>WENV182098327
OHHQ01000173
413179
Bacillota
CCC
Gly
>WENV182098775
OHHQ01009345
338131
Bacillota
GCC
Gly
>WENV182098446
OHHQ01000721
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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