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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182100144
OHHS01000445
267649
Bacillota
TAC
Val
>WENV182100193
OHHS01000872
267556
Bacillota
TAC
Val
>WENV182100400
OHHS01009454
235098
Bacillota
GAC
Val
>WENV182100179
OHHS01000774
44854
Bacillota
TGA
Ser
>WENV182100156
OHHS01000529
59312
Bacillota
CAG
Leu
>WENV182100057
OHHS01000085
338147
Bacillota
CTC
Glu
>WENV182100139
OHHS01000434
338147
Bacillota
CTC
Glu
>WENV182100161
OHHS01000550
338147
Bacillota
CTC
Glu
>WENV182100181
OHHS01000785
338147
Bacillota
CTC
Glu
>WENV182100403
OHHS01009673
235150
Bacillota
TGC
Ala
>WENV182100096
OHHS01000191
338143
Bacillota
CTC
Glu
>WENV182100081
OHHS01000128
235114
Bacillota
TTT
Lys
>WENV182100152
OHHS01000504
429429
Bacillota
CCA
Trp
>WENV182100155
OHHS01000529
44859
Bacillota
AAG
Leu
>WENV182100258
OHHS01001784
11034
Bacillota
GGA
Ser
>WENV182100162
OHHS01000551
295714
Bacillota
GCC
Gly
>WENV182100163
OHHS01000551
295714
Bacillota
GCC
Gly
>WENV182100361
OHHS01005566
338149
Bacillota
CTC
Glu
>WENV182100233
OHHS01001419
245298
Bacillota
CGG
Pro
>WENV182100201
OHHS01000913
37269
Bacillota
TGA
Ser
>WENV182100194
OHHS01000872
155089
Bacillota
CAT
Met
>WENV182100436
OHHS01019665
144599
Bacillota
GTC
Asp
>WENV182100079
OHHS01000128
144610
Bacillota
GTG
His
>WENV182100423
OHHS01016104
240017
Bacillota
GCC
Gly
>WENV182100232
OHHS01001419
411547
Bacillota
CTG
Gln
>WENV182100180
OHHS01000774
4624
Bacillota
GCT
Ser
>WENV182100300
OHHS01002660
235095
Bacillota
GGT
Thr
>WENV182100071
OHHS01000111
235142
Bacillota
CTT
Lys
>WENV182100391
OHHS01008381
148188
Bacillota
CCG
Arg
>WENV182100066
OHHS01000101
256380
Bacillota
>WENV182100269
OHHS01001960
338129
Bacillota
TGT
Thr
>WENV182100198
OHHS01000883
144583
Bacillota
ACG
Arg
>WENV182100068
OHHS01000101
238974
Bacillota
GAA
Phe
>WENV182100282
OHHS01002244
144621
Bacillota
GTT
Asn
>WENV182100234
OHHS01001456
58712
Bacillota
CAG
Leu
>WENV182100405
OHHS01009825
272992
Bacillota
CTT
Lys
>WENV182100342
OHHS01004667
344240
Bacillota
GCC
Gly
>WENV182100340
OHHS01004667
196632
Bacillota
GTC
Asp
>WENV182100322
OHHS01004003
144594
Bacillota
CAC
Val
>WENV182100056
OHHS01000085
95563
Bacillota
GTA
Tyr
>WENV182100072
OHHS01000114
414486
Bacillota
CCC
Gly
>WENV182100209
OHHS01001065
272488
Bacillota
GAA
Phe
>WENV182100230
OHHS01001303
114075
Bacillota
TAG
Leu
>WENV182100262
OHHS01001863
338131
Bacillota
GCC
Gly
>WENV182100341
OHHS01004667
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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