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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182104017
OHHZ01015401
24650
Bacillota
TAA
Leu
>WENV182103847
OHHZ01003459
196621
Bacillota
GTC
Asp
>WENV182103724
OHHZ01001024
144612
Bacillota
TCT
Arg
>WENV182104139
OHHZ01034996
338152
Bacillota
TTC
Glu
>WENV182103703
OHHZ01000811
44854
Bacillota
TGA
Ser
>WENV182104154
OHHZ01037815
235154
Bacillota
GTT
Asn
>WENV182103977
OHHZ01010637
37071
Bacillota
TGA
Ser
>WENV182104038
OHHZ01018155
304022
Bacillota
GCC
Gly
>WENV182103718
OHHZ01000945
302150
Bacillota
TAC
Val
>WENV182103733
OHHZ01001138
307003
Bacillota
TGC
Ala
>WENV182103545
OHHZ01000095
59312
Bacillota
CAG
Leu
>WENV182103670
OHHZ01000629
59312
Bacillota
CAG
Leu
>WENV182103519
OHHZ01000033
338147
Bacillota
CTC
Glu
>WENV182103616
OHHZ01000315
338147
Bacillota
CTC
Glu
>WENV182103617
OHHZ01000315
338147
Bacillota
CTC
Glu
>WENV182103618
OHHZ01000315
338147
Bacillota
CTC
Glu
>WENV182103748
OHHZ01001415
338147
Bacillota
CTC
Glu
>WENV182103791
OHHZ01002053
338147
Bacillota
CTC
Glu
>WENV182104082
OHHZ01023643
155273
Bacillota
CAT
Met
>WENV182103548
OHHZ01000108
293599
Bacillota
CTT
Lys
>WENV182103578
OHHZ01000154
235114
Bacillota
TTT
Lys
>WENV182103630
OHHZ01000352
144668
Bacillota
GTC
Asp
>WENV182103696
OHHZ01000741
429429
Bacillota
CCA
Trp
>WENV182103631
OHHZ01000352
41154
Bacillota
TAA
Leu
>WENV182103673
OHHZ01000682
11034
Bacillota
GGA
Ser
>WENV182103806
OHHZ01002270
11034
Bacillota
GGA
Ser
>WENV182104037
OHHZ01018155
235079
Bacillota
GAA
Phe
>WENV182104072
OHHZ01022110
173314
Bacillota
GAT
Ile
>WENV182103932
OHHZ01008552
338149
Bacillota
CTC
Glu
>WENV182103686
OHHZ01000713
245298
Bacillota
CGG
Pro
>WENV182104016
OHHZ01015167
287000
Bacillota
GTT
Asn
>WENV182103907
OHHZ01006591
162445
Bacillota
CAT
Met
>WENV182103507
OHHZ01000024
100326
Bacillota
GTA
Tyr
>WENV182103774
OHHZ01001915
100326
Bacillota
GTA
Tyr
>WENV182103685
OHHZ01000713
411547
Bacillota
CTG
Gln
>WENV182103987
OHHZ01011993
411547
Bacillota
CTG
Gln
>WENV182103896
OHHZ01006125
147684
Bacillota
ACG
Arg
>WENV182103704
OHHZ01000811
4624
Bacillota
GCT
Ser
>WENV182104204
OHHZ01051926
412387
Bacillota
GCA
Cys
>WENV182103848
OHHZ01003459
235095
Bacillota
GGT
Thr
>WENV182103867
OHHZ01004081
235095
Bacillota
GGT
Thr
>WENV182103759
OHHZ01001647
411549
Bacillota
TTG
Gln
>WENV182103535
OHHZ01000070
235142
Bacillota
CTT
Lys
>WENV182103773
OHHZ01001913
148188
Bacillota
CCG
Arg
>WENV182103828
OHHZ01002900
148188
Bacillota
CCG
Arg
>WENV182103829
OHHZ01002900
80612
Bacillota
GTA
Tyr
>WENV182103526
OHHZ01000049
235127
Bacillota
TTT
Lys
>WENV182103802
OHHZ01002216
235127
Bacillota
TTT
Lys
>WENV182103809
OHHZ01002406
163943
Bacillota
GTC
Asp
>WENV182103721
OHHZ01000956
235124
Bacillota
TGG
Pro
>WENV182103841
OHHZ01003135
235124
Bacillota
TGG
Pro
>WENV182103919
OHHZ01007311
338129
Bacillota
TGT
Thr
>WENV182103740
OHHZ01001284
144583
Bacillota
ACG
Arg
>WENV182103543
OHHZ01000089
236037
Bacillota
GTG
His
>WENV182103504
OHHZ01000024
144652
Bacillota
GTC
Asp
>WENV182104031
OHHZ01017023
247734
Bacillota
TGC
Ala
>WENV182103846
OHHZ01003459
235171
Bacillota
CCA
Trp
>WENV182103599
OHHZ01000219
238974
Bacillota
GAA
Phe
>WENV182103933
OHHZ01008552
144621
Bacillota
GTT
Asn
>WENV182103577
OHHZ01000154
235113
Bacillota
GAA
Phe
>WENV182103816
OHHZ01002584
243098
Bacillota
GGT
Thr
>WENV182103668
OHHZ01000566
58712
Bacillota
CAG
Leu
>WENV182103895
OHHZ01006026
58712
Bacillota
CAG
Leu
>WENV182103923
OHHZ01008150
245296
Bacillota
CCC
Gly
>WENV182103790
OHHZ01002045
272992
Bacillota
CTT
Lys
>WENV182103615
OHHZ01000310
344240
Bacillota
GCC
Gly
>WENV182103559
OHHZ01000120
196632
Bacillota
GTC
Asp
>WENV182104003
OHHZ01012946
178024
Bacillota
TCT
Arg
>WENV182104071
OHHZ01022110
299139
Bacillota
TGC
Ala
>WENV182103813
OHHZ01002499
144594
Bacillota
CAC
Val
>WENV182103881
OHHZ01005539
144594
Bacillota
CAC
Val
>WENV182103518
OHHZ01000033
95563
Bacillota
GTA
Tyr
>WENV182103525
OHHZ01000049
272488
Bacillota
GAA
Phe
>WENV182104235
OHHZ01061555
292012
Bacillota
TGC
Ala
>WENV182103836
OHHZ01003033
338128
Bacillota
TTC
Glu
>WENV182103560
OHHZ01000120
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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