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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182105996
OHIH01004570
235154
Bacillota
GTT
Asn
>WENV182106012
OHIH01007598
144668
Bacillota
GTC
Asp
>WENV182106050
OHIH01019844
429429
Bacillota
CCA
Trp
>WENV182105976
OHIH01002682
156937
Bacillota
GTG
His
>WENV182106021
OHIH01010404
37269
Bacillota
TGA
Ser
>WENV182105992
OHIH01003910
155089
Bacillota
CAT
Met
>WENV182106013
OHIH01008019
287000
Bacillota
GTT
Asn
>WENV182106046
OHIH01017772
147684
Bacillota
ACG
Arg
>WENV182106053
OHIH01020609
18852
Bacillota
GCT
Ser
>WENV182106003
OHIH01005660
59296
Bacillota
AAG
Leu
>WENV182106014
OHIH01008522
237846
Bacillota
GCC
Gly
>WENV182106034
OHIH01013222
338131
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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