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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182107713
OHIL01000001
235097
Bacteroidota
TTT
Lys
>WENV182107815
OHIL01000447
235102
Bacteroidota
CGT
Thr
>WENV182108085
OHIL01004772
146761
Bacteroidota
GAT
Ile
>WENV182108237
OHIL01012461
243025
Bacteroidota
CAT
Met
>WENV182107831
OHIL01000538
126965
Bacteroidota
GGG
Pro
>WENV182108418
OHIL01034739
17323
Bacteroidota
GGA
Ser
>WENV182107856
OHIL01000647
415410
Bacteroidota
TTG
Gln
>WENV182107777
OHIL01000144
155123
Bacteroidota
GTT
Asn
>WENV182108088
OHIL01004888
155123
Bacteroidota
GTT
Asn
>WENV182108131
OHIL01006287
344692
Bacteroidota
GGT
Thr
>WENV182107763
OHIL01000090
338124
Bacteroidota
CCG
Arg
>WENV182107781
OHIL01000161
338132
Bacteroidota
GCA
Cys
>WENV182108114
OHIL01005764
338132
Bacteroidota
GCA
Cys
>WENV182107724
OHIL01000020
144656
Bacteroidota
GTG
His
>WENV182107889
OHIL01000872
235207
Bacteroidota
CAT
Met
>WENV182108125
OHIL01006155
80607
Bacteroidota
GTA
Tyr
>WENV182107752
OHIL01000072
113604
Bacteroidota
>WENV182107717
OHIL01000004
144590
Bacteroidota
GTT
Asn
>WENV182107748
OHIL01000066
95559
Bacteroidota
TAG
Leu
>WENV182107727
OHIL01000028
144655
Bacteroidota
GGC
Ala
>WENV182107789
OHIL01000217
280469
Bacteroidota
CGT
Thr
>WENV182107716
OHIL01000004
44852
Bacteroidota
TAA
Leu
>WENV182107797
OHIL01000293
50727
Bacteroidota
TGA
Ser
>WENV182107827
OHIL01000523
50727
Bacteroidota
TGA
Ser
>WENV182107712
OHIL01000001
132360
Bacteroidota
GGG
Pro
>WENV182107888
OHIL01000868
132360
Bacteroidota
GGG
Pro
>WENV182107837
OHIL01000557
425638
Bacteroidota
CTG
Gln
>WENV182108132
OHIL01006297
19317
Bacteroidota
GGA
Ser
>WENV182108362
OHIL01026023
414426
Bacteroidota
CTG
Gln
>WENV182107757
OHIL01000076
59498
Bacteroidota
GAG
Leu
>WENV182107811
OHIL01000420
16224
Bacteroidota
GGA
Ser
>WENV182107792
OHIL01000261
16220
Bacteroidota
GGA
Ser
>WENV182107714
OHIL01000002
338125
Bacteroidota
CCT
Arg
>WENV182108358
OHIL01025270
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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