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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182112650
OHIU01041769
144612
Bacillota
TCT
Arg
>WENV182111913
OHIU01000004
154063
Bacillota
CGG
Pro
>WENV182112110
OHIU01000580
267556
Bacillota
TAC
Val
>WENV182112262
OHIU01002035
235098
Bacillota
GAC
Val
>WENV182111920
OHIU01000007
338152
Bacillota
TTC
Glu
>WENV182112579
OHIU01023118
44854
Bacillota
TGA
Ser
>WENV182112500
OHIU01013306
144577
Bacillota
GAT
Ile
>WENV182112435
OHIU01008492
37071
Bacillota
TGA
Ser
>WENV182112518
OHIU01015636
235150
Bacillota
TGC
Ala
>WENV182112548
OHIU01018328
11034
Bacillota
GGA
Ser
>WENV182112396
OHIU01006226
156937
Bacillota
GTG
His
>WENV182112346
OHIU01004096
274189
Bacillota
TGT
Thr
>WENV182112499
OHIU01013306
235087
Bacillota
TGC
Ala
>WENV182112492
OHIU01013154
338149
Bacillota
CTC
Glu
>WENV182112187
OHIU01000957
37269
Bacillota
TGA
Ser
>WENV182112113
OHIU01000604
287000
Bacillota
GTT
Asn
>WENV182112114
OHIU01000604
287000
Bacillota
GTT
Asn
>WENV182112218
OHIU01001286
169968
Bacillota
CAT
Met
>WENV182112179
OHIU01000931
413152
Bacillota
TCC
Gly
>WENV182112093
OHIU01000486
235078
Bacillota
TAC
Val
>WENV182112096
OHIU01000486
240017
Bacillota
GCC
Gly
>WENV182112479
OHIU01011757
411547
Bacillota
CTG
Gln
>WENV182112161
OHIU01000729
147684
Bacillota
ACG
Arg
>WENV182112580
OHIU01023118
4624
Bacillota
GCT
Ser
>WENV182112048
OHIU01000300
18852
Bacillota
GCT
Ser
>WENV182112061
OHIU01000346
18852
Bacillota
GCT
Ser
>WENV182112573
OHIU01022013
235095
Bacillota
GGT
Thr
>WENV182112300
OHIU01002896
411549
Bacillota
TTG
Gln
>WENV182112312
OHIU01003302
148188
Bacillota
CCG
Arg
>WENV182112470
OHIU01011188
80612
Bacillota
GTA
Tyr
>WENV182112263
OHIU01002071
235127
Bacillota
TTT
Lys
>WENV182112249
OHIU01001901
163943
Bacillota
GTC
Asp
>WENV182112279
OHIU01002484
163943
Bacillota
GTC
Asp
>WENV182112301
OHIU01002937
249522
Bacillota
TAC
Val
>WENV182112419
OHIU01007420
235124
Bacillota
TGG
Pro
>WENV182112553
OHIU01019645
338129
Bacillota
TGT
Thr
>WENV182112237
OHIU01001571
144583
Bacillota
ACG
Arg
>WENV182112356
OHIU01004445
247734
Bacillota
TGC
Ala
>WENV182112438
OHIU01008669
235171
Bacillota
CCA
Trp
>WENV182112493
OHIU01013154
144621
Bacillota
GTT
Asn
>WENV182112661
OHIU01043431
235113
Bacillota
GAA
Phe
>WENV182112367
OHIU01005065
277200
Bacillota
GGC
Ala
>WENV182112182
OHIU01000931
58712
Bacillota
CAG
Leu
>WENV182112260
OHIU01002016
344240
Bacillota
GCC
Gly
>WENV182112475
OHIU01011548
144594
Bacillota
CAC
Val
>WENV182111951
OHIU01000040
338127
Bacillota
TTG
Gln
>WENV182112087
OHIU01000463
272488
Bacillota
GAA
Phe
>WENV182112568
OHIU01021726
273862
Bacillota
TGC
Ala
>WENV182112252
OHIU01001904
338128
Bacillota
TTC
Glu
>WENV182112522
OHIU01016087
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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