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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182113820
OHIY01000236
235097
Bacteroidota
TTT
Lys
>WENV182113966
OHIY01000818
235102
Bacteroidota
CGT
Thr
>WENV182114128
OHIY01002538
267954
Bacteroidota
GCC
Gly
>WENV182114312
OHIY01015281
146761
Bacteroidota
GAT
Ile
>WENV182113999
OHIY01001041
144657
Bacteroidota
CGG
Pro
>WENV182114324
OHIY01016233
243025
Bacteroidota
CAT
Met
>WENV182114001
OHIY01001052
58715
Bacteroidota
GAG
Leu
>WENV182114224
OHIY01006518
48053
Bacteroidota
TGA
Ser
>WENV182114371
OHIY01019983
48053
Bacteroidota
TGA
Ser
>WENV182114370
OHIY01019956
413663
Bacteroidota
CTG
Gln
>WENV182114395
OHIY01025059
415410
Bacteroidota
TTG
Gln
>WENV182114000
OHIY01001052
59689
Bacteroidota
CAG
Leu
>WENV182113876
OHIY01000385
144695
Bacteroidota
CAT
Met
>WENV182113882
OHIY01000420
80835
Bacteroidota
GTA
Tyr
>WENV182114277
OHIY01012291
341950
Bacteroidota
>WENV182113758
OHIY01000101
338132
Bacteroidota
GCA
Cys
>WENV182113815
OHIY01000218
338132
Bacteroidota
GCA
Cys
>WENV182113845
OHIY01000320
37076
Bacteroidota
TAA
Leu
>WENV182114036
OHIY01001312
58714
Bacteroidota
CAA
Leu
>WENV182113750
OHIY01000097
144656
Bacteroidota
GTG
His
>WENV182113906
OHIY01000499
235207
Bacteroidota
CAT
Met
>WENV182113870
OHIY01000368
80607
Bacteroidota
GTA
Tyr
>WENV182113836
OHIY01000288
344769
Bacteroidota
CTC
Glu
>WENV182114372
OHIY01020202
154643
Bacteroidota
CAT
Met
>WENV182114101
OHIY01002032
415558
Bacteroidota
TTG
Gln
>WENV182113733
OHIY01000076
144590
Bacteroidota
GTT
Asn
>WENV182113776
OHIY01000124
419272
Bacteroidota
CTG
Gln
>WENV182113911
OHIY01000536
144655
Bacteroidota
GGC
Ala
>WENV182113898
OHIY01000477
95875
Bacteroidota
TAG
Leu
>WENV182114046
OHIY01001390
167013
Bacteroidota
TGG
Pro
>WENV182113996
OHIY01001034
44852
Bacteroidota
TAA
Leu
>WENV182113804
OHIY01000184
147439
Bacteroidota
TCT
Arg
>WENV182114211
OHIY01005674
95986
Bacteroidota
GTA
Tyr
>WENV182113721
OHIY01000057
132360
Bacteroidota
GGG
Pro
>WENV182113982
OHIY01000965
353927
Bacteroidota
TTC
Glu
>WENV182114276
OHIY01012291
353927
Bacteroidota
TTC
Glu
>WENV182113693
OHIY01000026
414426
Bacteroidota
CTG
Gln
>WENV182113896
OHIY01000469
16224
Bacteroidota
GGA
Ser
>WENV182113734
OHIY01000079
151960
Bacteroidota
GGC
Ala
>WENV182114090
OHIY01001874
16220
Bacteroidota
GGA
Ser
>WENV182113680
OHIY01000015
338125
Bacteroidota
CCT
Arg
>WENV182113957
OHIY01000775
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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