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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182119362
OHJI01000117
235097
Bacteroidota
TTT
Lys
>WENV182119713
OHJI01018296
235097
Bacteroidota
TTT
Lys
>WENV182119248
OHJI01000002
95987
Bacteroidota
CAA
Leu
>WENV182119261
OHJI01000011
339412
Bacteroidota
GGT
Thr
>WENV182119521
OHJI01001277
235102
Bacteroidota
CGT
Thr
>WENV182119601
OHJI01004170
144657
Bacteroidota
CGG
Pro
>WENV182119537
OHJI01001601
243025
Bacteroidota
CAT
Met
>WENV182119718
OHJI01019349
126966
Bacteroidota
TAC
Val
>WENV182119315
OHJI01000049
413663
Bacteroidota
CTG
Gln
>WENV182119353
OHJI01000099
415410
Bacteroidota
TTG
Gln
>WENV182119416
OHJI01000247
136244
Bacteroidota
TAC
Val
>WENV182119417
OHJI01000247
136244
Bacteroidota
TAC
Val
>WENV182119262
OHJI01000011
237797
Bacteroidota
CCA
Trp
>WENV182119304
OHJI01000034
412479
Bacteroidota
TTG
Gln
>WENV182119433
OHJI01000277
147147
Bacteroidota
GTG
His
>WENV182119434
OHJI01000277
147147
Bacteroidota
GTG
His
>WENV182119587
OHJI01003250
145504
Bacteroidota
TGT
Thr
>WENV182119314
OHJI01000048
338124
Bacteroidota
CCG
Arg
>WENV182119741
OHJI01026381
238121
Bacteroidota
CTT
Lys
>WENV182119449
OHJI01000396
338132
Bacteroidota
GCA
Cys
>WENV182119427
OHJI01000265
37076
Bacteroidota
TAA
Leu
>WENV182119349
OHJI01000086
144656
Bacteroidota
GTG
His
>WENV182119343
OHJI01000066
235207
Bacteroidota
CAT
Met
>WENV182119494
OHJI01000785
80607
Bacteroidota
GTA
Tyr
>WENV182119370
OHJI01000127
344769
Bacteroidota
CTC
Glu
>WENV182119371
OHJI01000127
344769
Bacteroidota
CTC
Glu
>WENV182119473
OHJI01000539
52358
Bacteroidota
TGA
Ser
>WENV182119477
OHJI01000597
154643
Bacteroidota
CAT
Met
>WENV182119739
OHJI01026094
175704
Bacteroidota
TGC
Ala
>WENV182119479
OHJI01000619
144590
Bacteroidota
GTT
Asn
>WENV182119480
OHJI01000619
144590
Bacteroidota
GTT
Asn
>WENV182119451
OHJI01000399
95559
Bacteroidota
TAG
Leu
>WENV182119301
OHJI01000033
419272
Bacteroidota
CTG
Gln
>WENV182119638
OHJI01005791
144655
Bacteroidota
GGC
Ala
>WENV182119608
OHJI01004596
338164
Bacteroidota
TTC
Glu
>WENV182119277
OHJI01000020
44852
Bacteroidota
TAA
Leu
>WENV182119454
OHJI01000412
196394
Bacteroidota
GTC
Asp
>WENV182119455
OHJI01000412
196394
Bacteroidota
GTC
Asp
>WENV182119302
OHJI01000033
132360
Bacteroidota
GGG
Pro
>WENV182119554
OHJI01002200
353927
Bacteroidota
TTC
Glu
>WENV182119547
OHJI01002132
414426
Bacteroidota
CTG
Gln
>WENV182119345
OHJI01000075
16224
Bacteroidota
GGA
Ser
>WENV182119385
OHJI01000153
16220
Bacteroidota
GGA
Ser
>WENV182119278
OHJI01000020
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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