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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182121424
OHJK01031844
119661
Verrucomicrobiota
CAA
Leu
>WENV182121440
OHJK01034329
155256
Verrucomicrobiota
TCT
Arg
>WENV182121478
OHJK01042819
414625
Verrucomicrobiota
CCC
Gly
>WENV182121466
OHJK01041000
246700
Verrucomicrobiota
TTC
Glu
>WENV182121479
OHJK01042819
419909
Verrucomicrobiota
TCC
Gly
>WENV182121363
OHJK01017207
82056
Verrucomicrobiota
TAA
Leu
>WENV182121248
OHJK01008727
344842
Verrucomicrobiota
CGT
Thr
>WENV182121435
OHJK01033634
170105
Verrucomicrobiota
CAT
Met
>WENV182121454
OHJK01037996
287733
Verrucomicrobiota
CCA
Trp
>WENV182121260
OHJK01009317
7274
Verrucomicrobiota
CGA
Ser
>WENV182121441
OHJK01034526
246260
Verrucomicrobiota
>WENV182121336
OHJK01014274
7256
Verrucomicrobiota
GCT
Ser
>WENV182121327
OHJK01013130
345124
Verrucomicrobiota
GTT
Asn
>WENV182121334
OHJK01014031
17023
Verrucomicrobiota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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