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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182122169
OHJO01000018
119475
Actinomycetota
TAA
Leu
>WENV182122270
OHJO01000226
144589
Actinomycetota
ACG
Arg
>WENV182122175
OHJO01000022
37070
Actinomycetota
CGA
Ser
>WENV182122196
OHJO01000044
235092
Actinomycetota
CCG
Arg
>WENV182122176
OHJO01000022
16219
Actinomycetota
GCT
Ser
>WENV182122274
OHJO01000236
235174
Actinomycetota
TGC
Ala
>WENV182122136
OHJO01000002
235101
Actinomycetota
TTT
Lys
>WENV182122251
OHJO01000153
144625
Actinomycetota
GTC
Asp
>WENV182122222
OHJO01000064
198659
Actinomycetota
TAC
Val
>WENV182122227
OHJO01000078
16223
Actinomycetota
GAG
Leu
>WENV182122359
OHJO01000517
144593
Actinomycetota
TAT
Ile
>WENV182122173
OHJO01000022
98279
Actinomycetota
GTA
Tyr
>WENV182122131
OHJO01000002
338148
Actinomycetota
CTG
Gln
>WENV182122433
OHJO01001125
235148
Actinomycetota
GTT
Asn
>WENV182122413
OHJO01000876
176456
Actinomycetota
TCT
Arg
>WENV182122242
OHJO01000115
411554
Actinomycetota
CCC
Gly
>WENV182122133
OHJO01000002
113601
Actinomycetota
TAG
Leu
>WENV182122170
OHJO01000018
144595
Actinomycetota
CAA
Leu
>WENV182122189
OHJO01000036
145343
Actinomycetota
GGG
Pro
>WENV182122228
OHJO01000079
235149
Actinomycetota
CCT
Arg
>WENV182122243
OHJO01000115
91808
Actinomycetota
CAG
Leu
>WENV182122132
OHJO01000002
235121
Actinomycetota
CGT
Thr
>WENV182122622
OHJO01006702
393408
Actinomycetota
TTC
Glu
>WENV182122171
OHJO01000018
144635
Actinomycetota
TGG
Pro
>WENV182122269
OHJO01000217
44851
Actinomycetota
TGA
Ser
>WENV182122389
OHJO01000733
235173
Actinomycetota
GGC
Ala
>WENV182122186
OHJO01000036
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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