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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182124172
OHJQ01004341
152473
Fusobacteriota
CAT
Met
>WENV182124207
OHJQ01006410
152471
Fusobacteriota
TGG
Pro
>WENV182124270
OHJQ01009914
156827
Fusobacteriota
GTC
Asp
>WENV182124296
OHJQ01011663
144694
Fusobacteriota
CAT
Met
>WENV182124168
OHJQ01004341
169674
Fusobacteriota
TGG
Pro
>WENV182124171
OHJQ01004341
156979
Fusobacteriota
TCT
Arg
>WENV182124177
OHJQ01004341
242889
Fusobacteriota
TGT
Thr
>WENV182124225
OHJQ01007294
151855
Fusobacteriota
TGC
Ala
>WENV182124389
OHJQ01029014
248710
Fusobacteriota
GTT
Asn
>WENV182124269
OHJQ01009914
248480
Fusobacteriota
TAC
Val
>WENV182124100
OHJQ01002369
114254
Fusobacteriota
TGA
Ser
>WENV182124174
OHJQ01004341
114254
Fusobacteriota
TGA
Ser
>WENV182124101
OHJQ01002369
17193
Fusobacteriota
GCT
Ser
>WENV182124170
OHJQ01004341
248546
Fusobacteriota
TTT
Lys
>WENV182124260
OHJQ01009065
156835
Fusobacteriota
CCT
Arg
>WENV182124176
OHJQ01004341
415120
Fusobacteriota
GCA
Cys
>WENV182124451
OHJQ01048461
113605
Fusobacteriota
TAG
Leu
>WENV182124173
OHJQ01004341
346237
Fusobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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