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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182124857
OHJR01032646
119661
Verrucomicrobiota
CAA
Leu
>WENV182124788
OHJR01016479
82054
Verrucomicrobiota
GTA
Tyr
>WENV182124725
OHJR01005915
128202
Verrucomicrobiota
GTC
Asp
>WENV182124647
OHJR01001007
246700
Verrucomicrobiota
TTC
Glu
>WENV182124765
OHJR01011872
344841
Verrucomicrobiota
CAC
Val
>WENV182124673
OHJR01002112
60880
Verrucomicrobiota
CAG
Leu
>WENV182124747
OHJR01008153
82056
Verrucomicrobiota
TAA
Leu
>WENV182124644
OHJR01000946
345123
Verrucomicrobiota
TGT
Thr
>WENV182124708
OHJR01004300
345110
Verrucomicrobiota
CCT
Arg
>WENV182124833
OHJR01024421
155268
Verrucomicrobiota
CGG
Pro
>WENV182124718
OHJR01005248
82181
Verrucomicrobiota
AAG
Leu
>WENV182124688
OHJR01003031
345119
Verrucomicrobiota
TAC
Val
>WENV182124695
OHJR01003402
345124
Verrucomicrobiota
GTT
Asn
>WENV182124783
OHJR01015143
345142
Verrucomicrobiota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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