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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182128355
OHJY01001607
144612
Bacillota
TCT
Arg
>WENV182128726
OHJY01017136
154063
Bacillota
CGG
Pro
>WENV182128342
OHJY01001403
235098
Bacillota
GAC
Val
>WENV182128805
OHJY01030396
148239
Bacillota
TCT
Arg
>WENV182128442
OHJY01003143
44854
Bacillota
TGA
Ser
>WENV182128767
OHJY01022732
144577
Bacillota
GAT
Ile
>WENV182128265
OHJY01000755
59312
Bacillota
CAG
Leu
>WENV182128644
OHJY01010163
338147
Bacillota
CTC
Glu
>WENV182128874
OHJY01051344
235150
Bacillota
TGC
Ala
>WENV182128586
OHJY01006964
235137
Bacillota
TGC
Ala
>WENV182128583
OHJY01006808
235114
Bacillota
TTT
Lys
>WENV182128264
OHJY01000755
44859
Bacillota
AAG
Leu
>WENV182128528
OHJY01005489
11034
Bacillota
GGA
Ser
>WENV182128806
OHJY01030396
156937
Bacillota
GTG
His
>WENV182128072
OHJY01000021
274189
Bacillota
TGT
Thr
>WENV182128322
OHJY01001190
274189
Bacillota
TGT
Thr
>WENV182128766
OHJY01022732
235087
Bacillota
TGC
Ala
>WENV182128757
OHJY01021039
173314
Bacillota
GAT
Ile
>WENV182128593
OHJY01007564
338149
Bacillota
CTC
Glu
>WENV182128430
OHJY01002837
245298
Bacillota
CGG
Pro
>WENV182128802
OHJY01030121
169968
Bacillota
CAT
Met
>WENV182128581
OHJY01006808
144610
Bacillota
GTG
His
>WENV182128429
OHJY01002837
411547
Bacillota
CTG
Gln
>WENV182128443
OHJY01003143
4624
Bacillota
GCT
Ser
>WENV182128115
OHJY01000077
263765
Bacillota
TAC
Val
>WENV182128491
OHJY01004129
419639
Bacillota
GCA
Cys
>WENV182128398
OHJY01002313
411549
Bacillota
TTG
Gln
>WENV182128539
OHJY01005697
411549
Bacillota
TTG
Gln
>WENV182128515
OHJY01004798
235142
Bacillota
CTT
Lys
>WENV182128349
OHJY01001536
148188
Bacillota
CCG
Arg
>WENV182128587
OHJY01007008
148188
Bacillota
CCG
Arg
>WENV182128577
OHJY01006775
80612
Bacillota
GTA
Tyr
>WENV182128408
OHJY01002472
163943
Bacillota
GTC
Asp
>WENV182128144
OHJY01000132
249522
Bacillota
TAC
Val
>WENV182128241
OHJY01000607
235124
Bacillota
TGG
Pro
>WENV182128233
OHJY01000530
144583
Bacillota
ACG
Arg
>WENV182128315
OHJY01001140
236037
Bacillota
GTG
His
>WENV182128719
OHJY01016869
144652
Bacillota
GTC
Asp
>WENV182128621
OHJY01009050
235171
Bacillota
CCA
Trp
>WENV182128630
OHJY01009564
235171
Bacillota
CCA
Trp
>WENV182128712
OHJY01016161
238974
Bacillota
GAA
Phe
>WENV182128594
OHJY01007564
144621
Bacillota
GTT
Asn
>WENV182128783
OHJY01024650
235113
Bacillota
GAA
Phe
>WENV182128871
OHJY01050705
243098
Bacillota
GGT
Thr
>WENV182128268
OHJY01000786
58712
Bacillota
CAG
Leu
>WENV182128210
OHJY01000378
245296
Bacillota
CCC
Gly
>WENV182128490
OHJY01004129
344240
Bacillota
GCC
Gly
>WENV182128659
OHJY01012851
144594
Bacillota
CAC
Val
>WENV182128781
OHJY01024650
95563
Bacillota
GTA
Tyr
>WENV182128498
OHJY01004426
272488
Bacillota
GAA
Phe
>WENV182128803
OHJY01030121
272488
Bacillota
GAA
Phe
>WENV182128123
OHJY01000086
273862
Bacillota
TGC
Ala
>WENV182128204
OHJY01000360
338128
Bacillota
TTC
Glu
>WENV182128224
OHJY01000438
338128
Bacillota
TTC
Glu
>WENV182128300
OHJY01000956
338128
Bacillota
TTC
Glu
>WENV182128489
OHJY01004129
245344
Bacillota
GAA
Phe
>WENV182128856
OHJY01045762
150669
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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