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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182131386
OHKD01000007
235097
Bacteroidota
TTT
Lys
>WENV182131380
OHKD01000003
95987
Bacteroidota
CAA
Leu
>WENV182131393
OHKD01000013
141635
Bacteroidota
TAC
Val
>WENV182131375
OHKD01000002
339412
Bacteroidota
GGT
Thr
>WENV182131402
OHKD01000024
235102
Bacteroidota
CGT
Thr
>WENV182131834
OHKD01010587
144657
Bacteroidota
CGG
Pro
>WENV182131450
OHKD01000111
243025
Bacteroidota
CAT
Met
>WENV182131835
OHKD01010863
343138
Bacteroidota
CCT
Arg
>WENV182131675
OHKD01002079
58715
Bacteroidota
GAG
Leu
>WENV182131784
OHKD01006074
17323
Bacteroidota
GGA
Ser
>WENV182131586
OHKD01000962
338486
Bacteroidota
CAT
Met
>WENV182131501
OHKD01000336
394247
Bacteroidota
CTC
Glu
>WENV182131502
OHKD01000336
394247
Bacteroidota
CTC
Glu
>WENV182131383
OHKD01000004
413663
Bacteroidota
CTG
Gln
>WENV182131384
OHKD01000004
413663
Bacteroidota
CTG
Gln
>WENV182131392
OHKD01000013
136244
Bacteroidota
TAC
Val
>WENV182131376
OHKD01000002
237797
Bacteroidota
CCA
Trp
>WENV182131674
OHKD01002079
59689
Bacteroidota
CAG
Leu
>WENV182131385
OHKD01000006
436206
Bacteroidota
TTG
Gln
>WENV182131701
OHKD01002606
20893
Bacteroidota
GGA
Ser
>WENV182131399
OHKD01000023
412479
Bacteroidota
TTG
Gln
>WENV182131412
OHKD01000036
147147
Bacteroidota
GTG
His
>WENV182131413
OHKD01000036
147147
Bacteroidota
GTG
His
>WENV182131837
OHKD01011220
344692
Bacteroidota
GGT
Thr
>WENV182131387
OHKD01000008
338124
Bacteroidota
CCG
Arg
>WENV182131595
OHKD01001089
238121
Bacteroidota
CTT
Lys
>WENV182131729
OHKD01003479
126641
Bacteroidota
TAC
Val
>WENV182131424
OHKD01000052
338132
Bacteroidota
GCA
Cys
>WENV182131832
OHKD01010420
338132
Bacteroidota
GCA
Cys
>WENV182131596
OHKD01001089
45423
Bacteroidota
TGA
Ser
>WENV182131400
OHKD01000023
37076
Bacteroidota
TAA
Leu
>WENV182131613
OHKD01001424
58714
Bacteroidota
CAA
Leu
>WENV182131471
OHKD01000201
301449
Bacteroidota
CGG
Pro
>WENV182131444
OHKD01000105
144656
Bacteroidota
GTG
His
>WENV182131428
OHKD01000061
235207
Bacteroidota
CAT
Met
>WENV182131419
OHKD01000042
143169
Bacteroidota
GGG
Pro
>WENV182131464
OHKD01000195
144659
Bacteroidota
GTG
His
>WENV182131411
OHKD01000035
80607
Bacteroidota
GTA
Tyr
>WENV182131851
OHKD01011637
80607
Bacteroidota
GTA
Tyr
>WENV182131437
OHKD01000085
113604
Bacteroidota
>WENV182131676
OHKD01002088
80614
Bacteroidota
>WENV182131540
OHKD01000608
154643
Bacteroidota
CAT
Met
>WENV182131903
OHKD01017750
175704
Bacteroidota
TGC
Ala
>WENV182131426
OHKD01000056
95559
Bacteroidota
TAG
Leu
>WENV182131443
OHKD01000103
144655
Bacteroidota
GGC
Ala
>WENV182131558
OHKD01000763
338164
Bacteroidota
TTC
Glu
>WENV182131559
OHKD01000763
338164
Bacteroidota
TTC
Glu
>WENV182131716
OHKD01003025
240012
Bacteroidota
CCC
Gly
>WENV182131474
OHKD01000213
147439
Bacteroidota
TCT
Arg
>WENV182131565
OHKD01000831
411550
Bacteroidota
CTG
Gln
>WENV182131548
OHKD01000664
196394
Bacteroidota
GTC
Asp
>WENV182131623
OHKD01001529
196394
Bacteroidota
GTC
Asp
>WENV182131493
OHKD01000296
425638
Bacteroidota
CTG
Gln
>WENV182131526
OHKD01000492
94703
Bacteroidota
GTA
Tyr
>WENV182131531
OHKD01000504
353927
Bacteroidota
TTC
Glu
>WENV182131597
OHKD01001106
185921
Bacteroidota
GTC
Asp
>WENV182131798
OHKD01007027
23696
Bacteroidota
GCT
Ser
>WENV182131484
OHKD01000258
414426
Bacteroidota
CTG
Gln
>WENV182131718
OHKD01003128
414426
Bacteroidota
CTG
Gln
>WENV182131389
OHKD01000010
56823
Bacteroidota
TGA
Ser
>WENV182131397
OHKD01000022
56823
Bacteroidota
TGA
Ser
>WENV182131706
OHKD01002651
56823
Bacteroidota
TGA
Ser
>WENV182131477
OHKD01000226
16224
Bacteroidota
GGA
Ser
>WENV182131418
OHKD01000042
16220
Bacteroidota
GGA
Ser
>WENV182131372
OHKD01000001
338125
Bacteroidota
CCT
Arg
>WENV182131514
OHKD01000394
235129
Bacteroidota
GCC
Gly
>WENV182131378
OHKD01000003
313363
Bacteroidota
GAA
Phe
>WENV182131405
OHKD01000028
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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