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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182134514
OHKH01019390
119661
Verrucomicrobiota
CAA
Leu
>WENV182134112
OHKH01000595
155256
Verrucomicrobiota
TCT
Arg
>WENV182134137
OHKH01000678
246701
Verrucomicrobiota
TTT
Lys
>WENV182134270
OHKH01002267
345141
Verrucomicrobiota
TTG
Gln
>WENV182134229
OHKH01001626
345133
Verrucomicrobiota
GAC
Val
>WENV182134330
OHKH01004267
82054
Verrucomicrobiota
GTA
Tyr
>WENV182134181
OHKH01000990
246677
Verrucomicrobiota
CTT
Lys
>WENV182134233
OHKH01001701
155264
Verrucomicrobiota
GGG
Pro
>WENV182134317
OHKH01003785
344845
Verrucomicrobiota
CTG
Gln
>WENV182134263
OHKH01002116
128202
Verrucomicrobiota
GTC
Asp
>WENV182134284
OHKH01002618
414625
Verrucomicrobiota
CCC
Gly
>WENV182134341
OHKH01004880
246700
Verrucomicrobiota
TTC
Glu
>WENV182134269
OHKH01002245
347038
Verrucomicrobiota
GCC
Gly
>WENV182134483
OHKH01014583
246687
Verrucomicrobiota
CGC
Ala
>WENV182134285
OHKH01002618
419909
Verrucomicrobiota
TCC
Gly
>WENV182134313
OHKH01003668
344841
Verrucomicrobiota
CAC
Val
>WENV182134082
OHKH01000450
60880
Verrucomicrobiota
CAG
Leu
>WENV182134253
OHKH01001987
82056
Verrucomicrobiota
TAA
Leu
>WENV182134180
OHKH01000990
344842
Verrucomicrobiota
CGT
Thr
>WENV182134184
OHKH01001052
170105
Verrucomicrobiota
CAT
Met
>WENV182134332
OHKH01004388
345123
Verrucomicrobiota
TGT
Thr
>WENV182134281
OHKH01002595
345110
Verrucomicrobiota
CCT
Arg
>WENV182134307
OHKH01003391
344839
Verrucomicrobiota
GTG
His
>WENV182134096
OHKH01000530
7274
Verrucomicrobiota
CGA
Ser
>WENV182134254
OHKH01001987
246260
Verrucomicrobiota
>WENV182134295
OHKH01002952
155268
Verrucomicrobiota
CGG
Pro
>WENV182134250
OHKH01001977
82181
Verrucomicrobiota
AAG
Leu
>WENV182134451
OHKH01010183
7256
Verrucomicrobiota
GCT
Ser
>WENV182134301
OHKH01003272
345115
Verrucomicrobiota
CAT
Met
>WENV182134552
OHKH01025511
345119
Verrucomicrobiota
TAC
Val
>WENV182134160
OHKH01000824
345124
Verrucomicrobiota
GTT
Asn
>WENV182134286
OHKH01002678
17023
Verrucomicrobiota
GGA
Ser
>WENV182134420
OHKH01007399
345142
Verrucomicrobiota
CCG
Arg
>WENV182134206
OHKH01001310
246709
Verrucomicrobiota
CAT
Met
>WENV182134227
OHKH01001615
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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