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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182138041
OHKN01000044
235097
Bacteroidota
TTT
Lys
>WENV182138309
OHKN01002158
235102
Bacteroidota
CGT
Thr
>WENV182138378
OHKN01003517
267954
Bacteroidota
GCC
Gly
>WENV182137984
OHKN01000004
243025
Bacteroidota
CAT
Met
>WENV182138100
OHKN01000109
243025
Bacteroidota
CAT
Met
>WENV182138232
OHKN01001036
338155
Bacteroidota
CTC
Glu
>WENV182138438
OHKN01006856
153993
Bacteroidota
GAT
Ile
>WENV182137987
OHKN01000005
17323
Bacteroidota
GGA
Ser
>WENV182138109
OHKN01000151
48053
Bacteroidota
TGA
Ser
>WENV182138240
OHKN01001166
48053
Bacteroidota
TGA
Ser
>WENV182138080
OHKN01000070
415410
Bacteroidota
TTG
Gln
>WENV182138331
OHKN01002489
415410
Bacteroidota
TTG
Gln
>WENV182138579
OHKN01020968
59689
Bacteroidota
CAG
Leu
>WENV182137974
OHKN01000002
344692
Bacteroidota
GGT
Thr
>WENV182138341
OHKN01002723
145504
Bacteroidota
TGT
Thr
>WENV182137973
OHKN01000002
341950
Bacteroidota
>WENV182138050
OHKN01000051
338124
Bacteroidota
CCG
Arg
>WENV182138095
OHKN01000098
338124
Bacteroidota
CCG
Arg
>WENV182138396
OHKN01004306
126641
Bacteroidota
TAC
Val
>WENV182138024
OHKN01000032
338132
Bacteroidota
GCA
Cys
>WENV182138131
OHKN01000267
338132
Bacteroidota
GCA
Cys
>WENV182138191
OHKN01000488
338132
Bacteroidota
GCA
Cys
>WENV182138289
OHKN01001889
338132
Bacteroidota
GCA
Cys
>WENV182138496
OHKN01010431
235165
Bacteroidota
CCA
Trp
>WENV182138261
OHKN01001603
144933
Bacteroidota
TCT
Arg
>WENV182138107
OHKN01000139
144656
Bacteroidota
GTG
His
>WENV182138079
OHKN01000065
235207
Bacteroidota
CAT
Met
>WENV182138086
OHKN01000077
235207
Bacteroidota
CAT
Met
>WENV182138119
OHKN01000192
235207
Bacteroidota
CAT
Met
>WENV182138105
OHKN01000125
144596
Bacteroidota
GGC
Ala
>WENV182138045
OHKN01000047
80607
Bacteroidota
GTA
Tyr
>WENV182138096
OHKN01000103
80607
Bacteroidota
GTA
Tyr
>WENV182137990
OHKN01000007
154643
Bacteroidota
CAT
Met
>WENV182138149
OHKN01000389
144590
Bacteroidota
GTT
Asn
>WENV182138098
OHKN01000107
419272
Bacteroidota
CTG
Gln
>WENV182138051
OHKN01000052
144655
Bacteroidota
GGC
Ala
>WENV182138534
OHKN01013378
144639
Bacteroidota
GGC
Ala
>WENV182138374
OHKN01003292
151121
Bacteroidota
CAT
Met
>WENV182138572
OHKN01018948
280513
Bacteroidota
TTT
Lys
>WENV182138099
OHKN01000107
132360
Bacteroidota
GGG
Pro
>WENV182138243
OHKN01001270
132360
Bacteroidota
GGG
Pro
>WENV182138042
OHKN01000045
19317
Bacteroidota
GGA
Ser
>WENV182138014
OHKN01000024
353927
Bacteroidota
TTC
Glu
>WENV182138231
OHKN01001036
23696
Bacteroidota
GCT
Ser
>WENV182138023
OHKN01000031
414426
Bacteroidota
CTG
Gln
>WENV182138048
OHKN01000050
414426
Bacteroidota
CTG
Gln
>WENV182138039
OHKN01000039
16224
Bacteroidota
GGA
Ser
>WENV182138185
OHKN01000445
16220
Bacteroidota
GGA
Ser
>WENV182138087
OHKN01000079
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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