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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182156977
OHLW01000088
235097
Bacteroidota
TTT
Lys
>WENV182156983
OHLW01000130
235097
Bacteroidota
TTT
Lys
>WENV182157054
OHLW01000843
235102
Bacteroidota
CGT
Thr
>WENV182157256
OHLW01007085
144657
Bacteroidota
CGG
Pro
>WENV182157089
OHLW01001353
243025
Bacteroidota
CAT
Met
>WENV182157030
OHLW01000478
338155
Bacteroidota
CTC
Glu
>WENV182157323
OHLW01019559
153993
Bacteroidota
GAT
Ile
>WENV182157133
OHLW01002319
46165
Bacteroidota
TGA
Ser
>WENV182157166
OHLW01003517
338486
Bacteroidota
CAT
Met
>WENV182156981
OHLW01000116
415410
Bacteroidota
TTG
Gln
>WENV182157033
OHLW01000501
415410
Bacteroidota
TTG
Gln
>WENV182157279
OHLW01008873
59689
Bacteroidota
CAG
Leu
>WENV182156967
OHLW01000059
338124
Bacteroidota
CCG
Arg
>WENV182157020
OHLW01000433
338132
Bacteroidota
GCA
Cys
>WENV182157066
OHLW01000933
338132
Bacteroidota
GCA
Cys
>WENV182157086
OHLW01001208
338132
Bacteroidota
GCA
Cys
>WENV182156959
OHLW01000040
193809
Bacteroidota
CAT
Met
>WENV182157122
OHLW01002167
235165
Bacteroidota
CCA
Trp
>WENV182156942
OHLW01000007
144656
Bacteroidota
GTG
His
>WENV182156994
OHLW01000206
235207
Bacteroidota
CAT
Met
>WENV182157278
OHLW01008804
235180
Bacteroidota
CCA
Trp
>WENV182157000
OHLW01000242
144596
Bacteroidota
GGC
Ala
>WENV182157146
OHLW01002699
154643
Bacteroidota
CAT
Met
>WENV182156976
OHLW01000077
95559
Bacteroidota
TAG
Leu
>WENV182156978
OHLW01000108
419272
Bacteroidota
CTG
Gln
>WENV182157168
OHLW01003654
144639
Bacteroidota
GGC
Ala
>WENV182157135
OHLW01002340
338164
Bacteroidota
TTC
Glu
>WENV182157340
OHLW01025032
95875
Bacteroidota
TAG
Leu
>WENV182157009
OHLW01000290
44852
Bacteroidota
TAA
Leu
>WENV182157138
OHLW01002477
147439
Bacteroidota
TCT
Arg
>WENV182157194
OHLW01004073
150485
Bacteroidota
GTT
Asn
>WENV182157195
OHLW01004073
150485
Bacteroidota
GTT
Asn
>WENV182157305
OHLW01013032
411550
Bacteroidota
CTG
Gln
>WENV182156985
OHLW01000147
50727
Bacteroidota
TGA
Ser
>WENV182156988
OHLW01000176
50727
Bacteroidota
TGA
Ser
>WENV182156948
OHLW01000016
132360
Bacteroidota
GGG
Pro
>WENV182157049
OHLW01000791
132360
Bacteroidota
GGG
Pro
>WENV182157203
OHLW01004358
132360
Bacteroidota
GGG
Pro
>WENV182156944
OHLW01000009
425638
Bacteroidota
CTG
Gln
>WENV182157013
OHLW01000347
425638
Bacteroidota
CTG
Gln
>WENV182157114
OHLW01002052
353927
Bacteroidota
TTC
Glu
>WENV182157029
OHLW01000478
23696
Bacteroidota
GCT
Ser
>WENV182156943
OHLW01000007
16224
Bacteroidota
GGA
Ser
>WENV182156979
OHLW01000108
16220
Bacteroidota
GGA
Ser
>WENV182157319
OHLW01018013
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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