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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182169520
OHMU01003905
155958
Bacillota
GAT
Ile
>WENV182169382
OHMU01000852
154063
Bacillota
CGG
Pro
>WENV182169546
OHMU01005497
235098
Bacillota
GAC
Val
>WENV182169754
OHMU01027260
235098
Bacillota
GAC
Val
>WENV182169690
OHMU01017759
44854
Bacillota
TGA
Ser
>WENV182169702
OHMU01019346
235154
Bacillota
GTT
Asn
>WENV182169526
OHMU01004241
307003
Bacillota
TGC
Ala
>WENV182169223
OHMU01000114
59312
Bacillota
CAG
Leu
>WENV182169175
OHMU01000047
338147
Bacillota
CTC
Glu
>WENV182169177
OHMU01000055
338147
Bacillota
CTC
Glu
>WENV182169303
OHMU01000289
338147
Bacillota
CTC
Glu
>WENV182169185
OHMU01000072
235114
Bacillota
TTT
Lys
>WENV182169761
OHMU01029156
144668
Bacillota
GTC
Asp
>WENV182169651
OHMU01012469
41154
Bacillota
TAA
Leu
>WENV182169366
OHMU01000664
44859
Bacillota
AAG
Leu
>WENV182169257
OHMU01000178
156937
Bacillota
GTG
His
>WENV182169765
OHMU01031496
173314
Bacillota
GAT
Ile
>WENV182169604
OHMU01008318
338149
Bacillota
CTC
Glu
>WENV182169733
OHMU01023915
245298
Bacillota
CGG
Pro
>WENV182169588
OHMU01007371
240017
Bacillota
GCC
Gly
>WENV182169660
OHMU01013681
411547
Bacillota
CTG
Gln
>WENV182169691
OHMU01017759
4624
Bacillota
GCT
Ser
>WENV182169578
OHMU01006699
18852
Bacillota
GCT
Ser
>WENV182169640
OHMU01011741
411549
Bacillota
TTG
Gln
>WENV182169231
OHMU01000129
235142
Bacillota
CTT
Lys
>WENV182169302
OHMU01000281
235142
Bacillota
CTT
Lys
>WENV182169314
OHMU01000339
163943
Bacillota
GTC
Asp
>WENV182169697
OHMU01018382
235124
Bacillota
TGG
Pro
>WENV182169652
OHMU01012957
338129
Bacillota
TGT
Thr
>WENV182169605
OHMU01008318
144621
Bacillota
GTT
Asn
>WENV182169184
OHMU01000072
235113
Bacillota
GAA
Phe
>WENV182169543
OHMU01005352
58712
Bacillota
CAG
Leu
>WENV182169676
OHMU01015452
245296
Bacillota
CCC
Gly
>WENV182169672
OHMU01014864
272992
Bacillota
CTT
Lys
>WENV182169611
OHMU01009297
144594
Bacillota
CAC
Val
>WENV182169274
OHMU01000204
95563
Bacillota
GTA
Tyr
>WENV182169348
OHMU01000520
338128
Bacillota
TTC
Glu
>WENV182169633
OHMU01010744
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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