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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182174273
OHNF01000064
235097
Bacteroidota
TTT
Lys
>WENV182174339
OHNF01000247
235102
Bacteroidota
CGT
Thr
>WENV182174830
OHNF01016018
144657
Bacteroidota
CGG
Pro
>WENV182174763
OHNF01009768
243025
Bacteroidota
CAT
Met
>WENV182174686
OHNF01005509
338155
Bacteroidota
CTC
Glu
>WENV182174510
OHNF01001534
150845
Bacteroidota
GTC
Asp
>WENV182174883
OHNF01022597
339341
Bacteroidota
GGT
Thr
>WENV182174639
OHNF01004538
343138
Bacteroidota
CCT
Arg
>WENV182174805
OHNF01013091
17323
Bacteroidota
GGA
Ser
>WENV182174594
OHNF01002907
95618
Bacteroidota
TAG
Leu
>WENV182174927
OHNF01032384
95618
Bacteroidota
TAG
Leu
>WENV182174661
OHNF01005165
338486
Bacteroidota
CAT
Met
>WENV182174367
OHNF01000359
48053
Bacteroidota
TGA
Ser
>WENV182174375
OHNF01000381
48053
Bacteroidota
TGA
Ser
>WENV182174442
OHNF01000823
48053
Bacteroidota
TGA
Ser
>WENV182174531
OHNF01001874
48053
Bacteroidota
TGA
Ser
>WENV182174540
OHNF01002048
48053
Bacteroidota
TGA
Ser
>WENV182174343
OHNF01000263
415410
Bacteroidota
TTG
Gln
>WENV182174663
OHNF01005220
411543
Bacteroidota
CTG
Gln
>WENV182174662
OHNF01005182
59689
Bacteroidota
CAG
Leu
>WENV182174922
OHNF01030396
80835
Bacteroidota
GTA
Tyr
>WENV182174208
OHNF01000003
338124
Bacteroidota
CCG
Arg
>WENV182174571
OHNF01002450
235203
Bacteroidota
TTT
Lys
>WENV182174325
OHNF01000204
126641
Bacteroidota
TAC
Val
>WENV182174205
OHNF01000002
338132
Bacteroidota
GCA
Cys
>WENV182174317
OHNF01000167
338132
Bacteroidota
GCA
Cys
>WENV182174735
OHNF01008021
338132
Bacteroidota
GCA
Cys
>WENV182174655
OHNF01004925
58714
Bacteroidota
CAA
Leu
>WENV182174831
OHNF01016140
144933
Bacteroidota
TCT
Arg
>WENV182174489
OHNF01001334
149691
Bacteroidota
GTT
Asn
>WENV182174301
OHNF01000132
144656
Bacteroidota
GTG
His
>WENV182174275
OHNF01000072
235207
Bacteroidota
CAT
Met
>WENV182174687
OHNF01005545
144659
Bacteroidota
GTG
His
>WENV182174640
OHNF01004548
235180
Bacteroidota
CCA
Trp
>WENV182174741
OHNF01008619
144596
Bacteroidota
GGC
Ala
>WENV182174302
OHNF01000135
80607
Bacteroidota
GTA
Tyr
>WENV182174749
OHNF01008857
80614
Bacteroidota
>WENV182174964
OHNF01041133
154643
Bacteroidota
CAT
Met
>WENV182174274
OHNF01000068
95559
Bacteroidota
TAG
Leu
>WENV182174232
OHNF01000018
419272
Bacteroidota
CTG
Gln
>WENV182174337
OHNF01000230
144655
Bacteroidota
GGC
Ala
>WENV182174604
OHNF01003217
95875
Bacteroidota
TAG
Leu
>WENV182174977
OHNF01044368
338314
Bacteroidota
CCT
Arg
>WENV182174538
OHNF01002030
240012
Bacteroidota
CCC
Gly
>WENV182174277
OHNF01000074
44852
Bacteroidota
TAA
Leu
>WENV182174634
OHNF01004279
147439
Bacteroidota
TCT
Arg
>WENV182174477
OHNF01001133
411550
Bacteroidota
CTG
Gln
>WENV182174792
OHNF01012292
338165
Bacteroidota
GGT
Thr
>WENV182174691
OHNF01005624
353927
Bacteroidota
TTC
Glu
>WENV182174656
OHNF01004975
414426
Bacteroidota
CTG
Gln
>WENV182174233
OHNF01000018
16220
Bacteroidota
GGA
Ser
>WENV182174223
OHNF01000010
338125
Bacteroidota
CCT
Arg
>WENV182174622
OHNF01003957
235129
Bacteroidota
GCC
Gly
>WENV182174732
OHNF01007700
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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