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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182177745
OHNK01003514
196621
Bacillota
GTC
Asp
>WENV182177798
OHNK01005235
196621
Bacillota
GTC
Asp
>WENV182177588
OHNK01001140
309417
Bacillota
GGC
Ala
>WENV182177681
OHNK01002125
309417
Bacillota
GGC
Ala
>WENV182177872
OHNK01009377
309417
Bacillota
GGC
Ala
>WENV182177834
OHNK01006659
144612
Bacillota
TCT
Arg
>WENV182178022
OHNK01035492
144612
Bacillota
TCT
Arg
>WENV182177617
OHNK01001348
235098
Bacillota
GAC
Val
>WENV182177787
OHNK01004517
235098
Bacillota
GAC
Val
>WENV182177612
OHNK01001347
338152
Bacillota
TTC
Glu
>WENV182177705
OHNK01002525
23769
Bacillota
TAA
Leu
>WENV182177710
OHNK01002659
44854
Bacillota
TGA
Ser
>WENV182177642
OHNK01001654
307003
Bacillota
TGC
Ala
>WENV182177857
OHNK01007656
238910
Bacillota
CTT
Lys
>WENV182177666
OHNK01001993
155273
Bacillota
CAT
Met
>WENV182177782
OHNK01004457
340802
Bacillota
TTG
Gln
>WENV182177732
OHNK01003240
144668
Bacillota
GTC
Asp
>WENV182177435
OHNK01000344
429429
Bacillota
CCA
Trp
>WENV182177733
OHNK01003240
41154
Bacillota
TAA
Leu
>WENV182177692
OHNK01002264
11034
Bacillota
GGA
Ser
>WENV182177513
OHNK01000672
338149
Bacillota
CTC
Glu
>WENV182177766
OHNK01004112
245298
Bacillota
CGG
Pro
>WENV182177838
OHNK01006859
37269
Bacillota
TGA
Ser
>WENV182177437
OHNK01000351
287000
Bacillota
GTT
Asn
>WENV182177881
OHNK01010246
169968
Bacillota
CAT
Met
>WENV182177916
OHNK01015271
413152
Bacillota
TCC
Gly
>WENV182177949
OHNK01020486
162445
Bacillota
CAT
Met
>WENV182177849
OHNK01007442
152492
Bacillota
GGG
Pro
>WENV182178004
OHNK01030086
153911
Bacillota
GAT
Ile
>WENV182178030
OHNK01038813
100326
Bacillota
GTA
Tyr
>WENV182177781
OHNK01004457
144610
Bacillota
GTG
His
>WENV182177765
OHNK01004112
411547
Bacillota
CTG
Gln
>WENV182177954
OHNK01021570
147684
Bacillota
ACG
Arg
>WENV182177711
OHNK01002659
4624
Bacillota
GCT
Ser
>WENV182177489
OHNK01000566
263765
Bacillota
TAC
Val
>WENV182177557
OHNK01000968
412387
Bacillota
GCA
Cys
>WENV182177242
OHNK01000011
248683
Bacillota
TTT
Lys
>WENV182177746
OHNK01003514
235095
Bacillota
GGT
Thr
>WENV182177799
OHNK01005235
235095
Bacillota
GGT
Thr
>WENV182177685
OHNK01002152
419639
Bacillota
GCA
Cys
>WENV182177801
OHNK01005282
411549
Bacillota
TTG
Gln
>WENV182177863
OHNK01008308
411549
Bacillota
TTG
Gln
>WENV182177933
OHNK01017656
59296
Bacillota
AAG
Leu
>WENV182177707
OHNK01002558
148188
Bacillota
CCG
Arg
>WENV182177633
OHNK01001580
80612
Bacillota
GTA
Tyr
>WENV182177874
OHNK01009561
256380
Bacillota
>WENV182177481
OHNK01000497
235127
Bacillota
TTT
Lys
>WENV182177613
OHNK01001347
241432
Bacillota
TGT
Thr
>WENV182177622
OHNK01001438
235124
Bacillota
TGG
Pro
>WENV182177919
OHNK01015332
338129
Bacillota
TGT
Thr
>WENV182177792
OHNK01005023
144583
Bacillota
ACG
Arg
>WENV182177408
OHNK01000253
236037
Bacillota
GTG
His
>WENV182177922
OHNK01015964
144652
Bacillota
GTC
Asp
>WENV182177761
OHNK01004028
247734
Bacillota
TGC
Ala
>WENV182177656
OHNK01001892
419877
Bacillota
TCC
Gly
>WENV182177744
OHNK01003514
235171
Bacillota
CCA
Trp
>WENV182177514
OHNK01000672
144621
Bacillota
GTT
Asn
>WENV182177313
OHNK01000079
243098
Bacillota
GGT
Thr
>WENV182177674
OHNK01002069
58712
Bacillota
CAG
Leu
>WENV182177637
OHNK01001600
21693
Bacillota
GCT
Ser
>WENV182177889
OHNK01011259
245296
Bacillota
CCC
Gly
>WENV182177690
OHNK01002228
272992
Bacillota
CTT
Lys
>WENV182177281
OHNK01000052
344240
Bacillota
GCC
Gly
>WENV182177378
OHNK01000184
196632
Bacillota
GTC
Asp
>WENV182177599
OHNK01001219
178024
Bacillota
TCT
Arg
>WENV182177903
OHNK01013077
144594
Bacillota
CAC
Val
>WENV182177973
OHNK01024570
114075
Bacillota
TAG
Leu
>WENV182177727
OHNK01003200
338128
Bacillota
TTC
Glu
>WENV182177379
OHNK01000184
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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