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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182178571
OHNL01030981
144589
Actinomycetota
ACG
Arg
>WENV182178503
OHNL01018316
37070
Actinomycetota
CGA
Ser
>WENV182178608
OHNL01041573
201717
Actinomycetota
CTT
Lys
>WENV182178393
OHNL01006027
16219
Actinomycetota
GCT
Ser
>WENV182178423
OHNL01007974
235174
Actinomycetota
TGC
Ala
>WENV182178566
OHNL01028809
235101
Actinomycetota
TTT
Lys
>WENV182178563
OHNL01027793
198659
Actinomycetota
TAC
Val
>WENV182178408
OHNL01006749
238473
Actinomycetota
GTG
His
>WENV182178354
OHNL01003911
98279
Actinomycetota
GTA
Tyr
>WENV182178320
OHNL01002409
338148
Actinomycetota
CTG
Gln
>WENV182178576
OHNL01031778
176456
Actinomycetota
TCT
Arg
>WENV182178396
OHNL01006114
144595
Actinomycetota
CAA
Leu
>WENV182178288
OHNL01001625
235149
Actinomycetota
CCT
Arg
>WENV182178452
OHNL01009924
235121
Actinomycetota
CGT
Thr
>WENV182178283
OHNL01001564
80622
Actinomycetota
CAG
Leu
>WENV182178461
OHNL01012548
44851
Actinomycetota
TGA
Ser
>WENV182178424
OHNL01007974
235173
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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