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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182179051
OHNM01028405
243647
Bacillota
TTT
Lys
>WENV182178661
OHNM01000349
26899
Bacillota
GGA
Ser
>WENV182178702
OHNM01000746
235098
Bacillota
GAC
Val
>WENV182178848
OHNM01005456
148239
Bacillota
TCT
Arg
>WENV182178781
OHNM01003212
44854
Bacillota
TGA
Ser
>WENV182178914
OHNM01010888
37071
Bacillota
TGA
Ser
>WENV182178978
OHNM01016892
59312
Bacillota
CAG
Leu
>WENV182178983
OHNM01017639
238910
Bacillota
CTT
Lys
>WENV182178933
OHNM01012379
338147
Bacillota
CTC
Glu
>WENV182178966
OHNM01015405
235150
Bacillota
TGC
Ala
>WENV182178979
OHNM01017040
235137
Bacillota
TGC
Ala
>WENV182179042
OHNM01026142
419288
Bacillota
GGT
Thr
>WENV182178851
OHNM01005456
235114
Bacillota
TTT
Lys
>WENV182178910
OHNM01010683
268272
Bacillota
TGC
Ala
>WENV182178949
OHNM01014349
11034
Bacillota
GGA
Ser
>WENV182178994
OHNM01018384
247057
Bacillota
TGC
Ala
>WENV182179047
OHNM01027833
235079
Bacillota
GAA
Phe
>WENV182178734
OHNM01001415
173314
Bacillota
GAT
Ile
>WENV182179053
OHNM01028405
243612
Bacillota
TAC
Val
>WENV182178889
OHNM01008447
338149
Bacillota
CTC
Glu
>WENV182178797
OHNM01003586
245298
Bacillota
CGG
Pro
>WENV182178849
OHNM01005456
144610
Bacillota
GTG
His
>WENV182178907
OHNM01009808
240017
Bacillota
GCC
Gly
>WENV182178796
OHNM01003586
411547
Bacillota
CTG
Gln
>WENV182178782
OHNM01003212
4624
Bacillota
GCT
Ser
>WENV182178638
OHNM01000118
248683
Bacillota
TTT
Lys
>WENV182179002
OHNM01018981
235095
Bacillota
GGT
Thr
>WENV182178774
OHNM01002977
241471
Bacillota
TGC
Ala
>WENV182178885
OHNM01008032
411549
Bacillota
TTG
Gln
>WENV182178906
OHNM01009768
80612
Bacillota
GTA
Tyr
>WENV182178785
OHNM01003305
163943
Bacillota
GTC
Asp
>WENV182178742
OHNM01001717
235124
Bacillota
TGG
Pro
>WENV182178973
OHNM01016698
345314
Bacillota
TTG
Gln
>WENV182178668
OHNM01000413
144583
Bacillota
ACG
Arg
>WENV182178843
OHNM01005362
236037
Bacillota
GTG
His
>WENV182178905
OHNM01009699
235171
Bacillota
CCA
Trp
>WENV182178666
OHNM01000396
243098
Bacillota
GGT
Thr
>WENV182178865
OHNM01006867
58712
Bacillota
CAG
Leu
>WENV182179039
OHNM01025787
245296
Bacillota
CCC
Gly
>WENV182178890
OHNM01008447
272992
Bacillota
CTT
Lys
>WENV182178735
OHNM01001473
344240
Bacillota
GCC
Gly
>WENV182179012
OHNM01020587
144594
Bacillota
CAC
Val
>WENV182178969
OHNM01015504
95563
Bacillota
GTA
Tyr
>WENV182179008
OHNM01019743
238945
Bacillota
GCC
Gly
>WENV182178758
OHNM01002255
338128
Bacillota
TTC
Glu
>WENV182178683
OHNM01000469
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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