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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182191553
OHOR01027751
196621
Bacillota
GTC
Asp
>WENV182191324
OHOR01002608
309417
Bacillota
GGC
Ala
>WENV182191316
OHOR01002415
144612
Bacillota
TCT
Arg
>WENV182191575
OHOR01031913
235134
Bacillota
GAA
Phe
>WENV182191270
OHOR01001747
235098
Bacillota
GAC
Val
>WENV182191361
OHOR01003712
235098
Bacillota
GAC
Val
>WENV182191474
OHOR01013875
338152
Bacillota
TTC
Glu
>WENV182191520
OHOR01019119
144577
Bacillota
GAT
Ile
>WENV182191441
OHOR01008191
304022
Bacillota
GCC
Gly
>WENV182191252
OHOR01001428
307003
Bacillota
TGC
Ala
>WENV182191353
OHOR01003510
238910
Bacillota
CTT
Lys
>WENV182191484
OHOR01015331
235137
Bacillota
TGC
Ala
>WENV182191461
OHOR01011307
144668
Bacillota
GTC
Asp
>WENV182191391
OHOR01004796
429429
Bacillota
CCA
Trp
>WENV182191381
OHOR01004554
313454
Bacillota
GAA
Phe
>WENV182191462
OHOR01011307
41154
Bacillota
TAA
Leu
>WENV182191383
OHOR01004678
44859
Bacillota
AAG
Leu
>WENV182191305
OHOR01002013
11034
Bacillota
GGA
Ser
>WENV182191428
OHOR01006732
11034
Bacillota
GGA
Ser
>WENV182191587
OHOR01035470
235079
Bacillota
GAA
Phe
>WENV182191519
OHOR01019119
235087
Bacillota
TGC
Ala
>WENV182191380
OHOR01004517
245298
Bacillota
CGG
Pro
>WENV182191088
OHOR01000229
37269
Bacillota
TGA
Ser
>WENV182191473
OHOR01013875
287000
Bacillota
GTT
Asn
>WENV182191585
OHOR01034639
152492
Bacillota
GGG
Pro
>WENV182191255
OHOR01001507
100326
Bacillota
GTA
Tyr
>WENV182191055
OHOR01000132
144610
Bacillota
GTG
His
>WENV182191576
OHOR01031913
240017
Bacillota
GCC
Gly
>WENV182191379
OHOR01004517
411547
Bacillota
CTG
Gln
>WENV182191303
OHOR01001992
235095
Bacillota
GGT
Thr
>WENV182191406
OHOR01005618
419639
Bacillota
GCA
Cys
>WENV182191374
OHOR01004354
411549
Bacillota
TTG
Gln
>WENV182191363
OHOR01003766
148188
Bacillota
CCG
Arg
>WENV182191416
OHOR01005847
80612
Bacillota
GTA
Tyr
>WENV182191208
OHOR01000941
256380
Bacillota
>WENV182191515
OHOR01018874
163943
Bacillota
GTC
Asp
>WENV182191115
OHOR01000319
298620
Bacillota
CAT
Met
>WENV182191356
OHOR01003551
235124
Bacillota
TGG
Pro
>WENV182191403
OHOR01005349
338129
Bacillota
TGT
Thr
>WENV182191419
OHOR01006200
338129
Bacillota
TGT
Thr
>WENV182191552
OHOR01027751
235171
Bacillota
CCA
Trp
>WENV182191226
OHOR01001119
238974
Bacillota
GAA
Phe
>WENV182191174
OHOR01000721
235113
Bacillota
GAA
Phe
>WENV182191346
OHOR01003233
243098
Bacillota
GGT
Thr
>WENV182191238
OHOR01001287
58712
Bacillota
CAG
Leu
>WENV182191259
OHOR01001569
245296
Bacillota
CCC
Gly
>WENV182191495
OHOR01015916
272992
Bacillota
CTT
Lys
>WENV182190987
OHOR01000041
344240
Bacillota
GCC
Gly
>WENV182191173
OHOR01000720
178024
Bacillota
TCT
Arg
>WENV182191002
OHOR01000053
338127
Bacillota
TTG
Gln
>WENV182191308
OHOR01002216
114075
Bacillota
TAG
Leu
>WENV182191164
OHOR01000659
338128
Bacillota
TTC
Glu
>WENV182191371
OHOR01004170
338128
Bacillota
TTC
Glu
>WENV182191154
OHOR01000527
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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