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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182200808
OHPL01004999
196621
Bacillota
GTC
Asp
>WENV182200250
OHPL01000156
309417
Bacillota
GGC
Ala
>WENV182200422
OHPL01000540
309417
Bacillota
GGC
Ala
>WENV182200566
OHPL01001237
309417
Bacillota
GGC
Ala
>WENV182200138
OHPL01000023
352996
Bacillota
TTC
Glu
>WENV182201094
OHPL01023070
158247
Bacillota
>WENV182200683
OHPL01002490
37213
Bacillota
TGA
Ser
>WENV182200427
OHPL01000580
144612
Bacillota
TCT
Arg
>WENV182200450
OHPL01000619
144612
Bacillota
TCT
Arg
>WENV182200359
OHPL01000365
235098
Bacillota
GAC
Val
>WENV182200554
OHPL01001170
235098
Bacillota
GAC
Val
>WENV182200881
OHPL01008094
235098
Bacillota
GAC
Val
>WENV182200680
OHPL01002462
338152
Bacillota
TTC
Glu
>WENV182200307
OHPL01000251
44854
Bacillota
TGA
Ser
>WENV182200610
OHPL01001643
44854
Bacillota
TGA
Ser
>WENV182200963
OHPL01011597
235154
Bacillota
GTT
Asn
>WENV182201120
OHPL01028014
144577
Bacillota
GAT
Ile
>WENV182200541
OHPL01001075
307003
Bacillota
TGC
Ala
>WENV182200998
OHPL01014137
238910
Bacillota
CTT
Lys
>WENV182201132
OHPL01031352
338147
Bacillota
CTC
Glu
>WENV182201053
OHPL01019723
235150
Bacillota
TGC
Ala
>WENV182200806
OHPL01004959
293599
Bacillota
CTT
Lys
>WENV182200836
OHPL01005919
281701
Bacillota
TGC
Ala
>WENV182200780
OHPL01004640
235114
Bacillota
TTT
Lys
>WENV182200981
OHPL01012121
429429
Bacillota
CCA
Trp
>WENV182200336
OHPL01000304
11034
Bacillota
GGA
Ser
>WENV182200882
OHPL01008162
11034
Bacillota
GGA
Ser
>WENV182200593
OHPL01001454
274189
Bacillota
TGT
Thr
>WENV182201119
OHPL01028014
235087
Bacillota
TGC
Ala
>WENV182200707
OHPL01003002
173314
Bacillota
GAT
Ile
>WENV182200941
OHPL01010436
338149
Bacillota
CTC
Glu
>WENV182200927
OHPL01009705
245298
Bacillota
CGG
Pro
>WENV182200851
OHPL01006924
340131
Bacillota
GTT
Asn
>WENV182200093
OHPL01000001
155089
Bacillota
CAT
Met
>WENV182200300
OHPL01000231
287000
Bacillota
GTT
Asn
>WENV182200301
OHPL01000231
287000
Bacillota
GTT
Asn
>WENV182200124
OHPL01000015
169968
Bacillota
CAT
Met
>WENV182200180
OHPL01000048
100326
Bacillota
GTA
Tyr
>WENV182200720
OHPL01003299
144610
Bacillota
GTG
His
>WENV182200549
OHPL01001135
411547
Bacillota
CTG
Gln
>WENV182200661
OHPL01002210
411547
Bacillota
CTG
Gln
>WENV182200926
OHPL01009705
411547
Bacillota
CTG
Gln
>WENV182200308
OHPL01000251
4624
Bacillota
GCT
Ser
>WENV182200611
OHPL01001643
4624
Bacillota
GCT
Ser
>WENV182200324
OHPL01000292
263765
Bacillota
TAC
Val
>WENV182200506
OHPL01000927
235095
Bacillota
GGT
Thr
>WENV182200896
OHPL01008883
235095
Bacillota
GGT
Thr
>WENV182200494
OHPL01000867
411549
Bacillota
TTG
Gln
>WENV182200616
OHPL01001683
411549
Bacillota
TTG
Gln
>WENV182200163
OHPL01000036
235142
Bacillota
CTT
Lys
>WENV182200321
OHPL01000287
148188
Bacillota
CCG
Arg
>WENV182200676
OHPL01002430
80612
Bacillota
GTA
Tyr
>WENV182200401
OHPL01000459
249522
Bacillota
TAC
Val
>WENV182200133
OHPL01000022
241432
Bacillota
TGT
Thr
>WENV182200606
OHPL01001624
235124
Bacillota
TGG
Pro
>WENV182200658
OHPL01002176
235124
Bacillota
TGG
Pro
>WENV182200446
OHPL01000608
144583
Bacillota
ACG
Arg
>WENV182200807
OHPL01004999
235171
Bacillota
CCA
Trp
>WENV182200447
OHPL01000613
91122
Bacillota
CAA
Leu
>WENV182200251
OHPL01000156
144621
Bacillota
GTT
Asn
>WENV182200738
OHPL01003607
58712
Bacillota
CAG
Leu
>WENV182200756
OHPL01004026
58712
Bacillota
CAG
Leu
>WENV182200888
OHPL01008436
170245
Bacillota
CAT
Met
>WENV182200546
OHPL01001126
245296
Bacillota
CCC
Gly
>WENV182201099
OHPL01024375
272992
Bacillota
CTT
Lys
>WENV182200423
OHPL01000542
144594
Bacillota
CAC
Val
>WENV182200125
OHPL01000015
272488
Bacillota
GAA
Phe
>WENV182200928
OHPL01009744
292012
Bacillota
TGC
Ala
>WENV182200484
OHPL01000808
338128
Bacillota
TTC
Glu
>WENV182200750
OHPL01003862
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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