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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182201162
OHPL01036835
119661
Verrucomicrobiota
CAA
Leu
>WENV182200597
OHPL01001480
155256
Verrucomicrobiota
TCT
Arg
>WENV182200590
OHPL01001387
246701
Verrucomicrobiota
TTT
Lys
>WENV182200601
OHPL01001551
345141
Verrucomicrobiota
TTG
Gln
>WENV182200957
OHPL01011442
345133
Verrucomicrobiota
GAC
Val
>WENV182200813
OHPL01005395
82054
Verrucomicrobiota
GTA
Tyr
>WENV182200643
OHPL01001993
246677
Verrucomicrobiota
CTT
Lys
>WENV182200603
OHPL01001567
344844
Verrucomicrobiota
GCA
Cys
>WENV182200929
OHPL01009749
155264
Verrucomicrobiota
GGG
Pro
>WENV182201081
OHPL01022095
344845
Verrucomicrobiota
CTG
Gln
>WENV182200622
OHPL01001749
128202
Verrucomicrobiota
GTC
Asp
>WENV182200564
OHPL01001235
414625
Verrucomicrobiota
CCC
Gly
>WENV182200577
OHPL01001270
46246
Verrucomicrobiota
TGA
Ser
>WENV182200746
OHPL01003774
97755
Verrucomicrobiota
TAG
Leu
>WENV182200441
OHPL01000603
246700
Verrucomicrobiota
TTC
Glu
>WENV182200285
OHPL01000215
246687
Verrucomicrobiota
CGC
Ala
>WENV182200732
OHPL01003473
344841
Verrucomicrobiota
CAC
Val
>WENV182200994
OHPL01013706
60880
Verrucomicrobiota
CAG
Leu
>WENV182200582
OHPL01001307
82056
Verrucomicrobiota
TAA
Leu
>WENV182200642
OHPL01001993
344842
Verrucomicrobiota
CGT
Thr
>WENV182200385
OHPL01000400
170105
Verrucomicrobiota
CAT
Met
>WENV182200552
OHPL01001150
287733
Verrucomicrobiota
CCA
Trp
>WENV182200767
OHPL01004355
345123
Verrucomicrobiota
TGT
Thr
>WENV182200990
OHPL01012947
345110
Verrucomicrobiota
CCT
Arg
>WENV182200442
OHPL01000603
344839
Verrucomicrobiota
GTG
His
>WENV182200500
OHPL01000879
7274
Verrucomicrobiota
CGA
Ser
>WENV182200583
OHPL01001307
246260
Verrucomicrobiota
>WENV182200505
OHPL01000926
155268
Verrucomicrobiota
CGG
Pro
>WENV182200762
OHPL01004212
246728
Verrucomicrobiota
GAA
Phe
>WENV182200816
OHPL01005558
7256
Verrucomicrobiota
GCT
Ser
>WENV182200744
OHPL01003734
345115
Verrucomicrobiota
CAT
Met
>WENV182200395
OHPL01000439
345124
Verrucomicrobiota
GTT
Asn
>WENV182200841
OHPL01006166
368497
Verrucomicrobiota
GCC
Gly
>WENV182200636
OHPL01001888
345142
Verrucomicrobiota
CCG
Arg
>WENV182200443
OHPL01000603
246709
Verrucomicrobiota
CAT
Met
>WENV182200763
OHPL01004212
154693
Verrucomicrobiota
TGG
Pro
>WENV182200773
OHPL01004490
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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