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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182201712
OHPM01025306
24650
Bacillota
TAA
Leu
>WENV182201758
OHPM01040653
235098
Bacillota
GAC
Val
>WENV182201634
OHPM01012302
235154
Bacillota
GTT
Asn
>WENV182201744
OHPM01034883
144577
Bacillota
GAT
Ile
>WENV182201325
OHPM01000294
106802
Bacillota
GTA
Tyr
>WENV182201397
OHPM01001063
144668
Bacillota
GTC
Asp
>WENV182201374
OHPM01000628
429429
Bacillota
CCA
Trp
>WENV182201652
OHPM01014596
274189
Bacillota
TGT
Thr
>WENV182201719
OHPM01027642
235079
Bacillota
GAA
Phe
>WENV182201644
OHPM01013353
173314
Bacillota
GAT
Ile
>WENV182201415
OHPM01001467
240017
Bacillota
GCC
Gly
>WENV182201421
OHPM01001702
18852
Bacillota
GCT
Ser
>WENV182201631
OHPM01012195
148188
Bacillota
CCG
Arg
>WENV182201303
OHPM01000164
235127
Bacillota
TTT
Lys
>WENV182201515
OHPM01004232
298620
Bacillota
CAT
Met
>WENV182201571
OHPM01006402
247734
Bacillota
TGC
Ala
>WENV182201623
OHPM01011658
272992
Bacillota
CTT
Lys
>WENV182201583
OHPM01007379
198135
Bacillota
GAT
Ile
>WENV182201612
OHPM01010222
338127
Bacillota
TTG
Gln
>WENV182201632
OHPM01012291
272488
Bacillota
GAA
Phe
>WENV182201507
OHPM01004130
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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