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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182201220
OHPM01000034
235097
Bacteroidota
TTT
Lys
>WENV182201520
OHPM01004276
95987
Bacteroidota
CAA
Leu
>WENV182201232
OHPM01000072
235102
Bacteroidota
CGT
Thr
>WENV182201497
OHPM01003869
146761
Bacteroidota
GAT
Ile
>WENV182201429
OHPM01001843
144657
Bacteroidota
CGG
Pro
>WENV182201191
OHPM01000001
338155
Bacteroidota
CTC
Glu
>WENV182201390
OHPM01000914
58715
Bacteroidota
GAG
Leu
>WENV182201676
OHPM01018418
338486
Bacteroidota
CAT
Met
>WENV182201254
OHPM01000088
415410
Bacteroidota
TTG
Gln
>WENV182201364
OHPM01000505
338124
Bacteroidota
CCG
Arg
>WENV182201541
OHPM01004927
238121
Bacteroidota
CTT
Lys
>WENV182201542
OHPM01004927
238121
Bacteroidota
CTT
Lys
>WENV182201249
OHPM01000080
126641
Bacteroidota
TAC
Val
>WENV182201224
OHPM01000048
338132
Bacteroidota
GCA
Cys
>WENV182201261
OHPM01000102
338132
Bacteroidota
GCA
Cys
>WENV182201521
OHPM01004303
193809
Bacteroidota
CAT
Met
>WENV182201505
OHPM01004111
46489
Bacteroidota
TGA
Ser
>WENV182201741
OHPM01034056
235165
Bacteroidota
CCA
Trp
>WENV182201391
OHPM01000925
144933
Bacteroidota
TCT
Arg
>WENV182201209
OHPM01000021
144933
Bacteroidota
TCT
Arg
>WENV182201696
OHPM01022351
144656
Bacteroidota
GTG
His
>WENV182201269
OHPM01000128
235207
Bacteroidota
CAT
Met
>WENV182201251
OHPM01000084
144596
Bacteroidota
GGC
Ala
>WENV182201212
OHPM01000023
80607
Bacteroidota
GTA
Tyr
>WENV182201305
OHPM01000183
80607
Bacteroidota
GTA
Tyr
>WENV182201193
OHPM01000002
80607
Bacteroidota
GTA
Tyr
>WENV182201368
OHPM01000576
16999
Bacteroidota
GGA
Ser
>WENV182201393
OHPM01000998
80614
Bacteroidota
>WENV182201186
OHPM01000001
52358
Bacteroidota
TGA
Ser
>WENV182201228
OHPM01000051
52358
Bacteroidota
TGA
Ser
>WENV182201288
OHPM01000140
52358
Bacteroidota
TGA
Ser
>WENV182201697
OHPM01022614
154643
Bacteroidota
CAT
Met
>WENV182201255
OHPM01000090
419272
Bacteroidota
CTG
Gln
>WENV182201290
OHPM01000148
144655
Bacteroidota
GGC
Ala
>WENV182201405
OHPM01001180
95875
Bacteroidota
TAG
Leu
>WENV182201389
OHPM01000912
240012
Bacteroidota
CCC
Gly
>WENV182201318
OHPM01000232
44852
Bacteroidota
TAA
Leu
>WENV182201513
OHPM01004231
338165
Bacteroidota
GGT
Thr
>WENV182201198
OHPM01000005
425638
Bacteroidota
CTG
Gln
>WENV182201202
OHPM01000010
425638
Bacteroidota
CTG
Gln
>WENV182201223
OHPM01000045
239647
Bacteroidota
TTT
Lys
>WENV182201606
OHPM01009907
353927
Bacteroidota
TTC
Glu
>WENV182201394
OHPM01000998
185921
Bacteroidota
GTC
Asp
>WENV182201190
OHPM01000001
23696
Bacteroidota
GCT
Ser
>WENV182201693
OHPM01021983
23696
Bacteroidota
GCT
Ser
>WENV182201752
OHPM01037809
414426
Bacteroidota
CTG
Gln
>WENV182201638
OHPM01012679
151960
Bacteroidota
GGC
Ala
>WENV182201208
OHPM01000019
338125
Bacteroidota
CCT
Arg
>WENV182201470
OHPM01002801
338125
Bacteroidota
CCT
Arg
>WENV182201602
OHPM01009621
235129
Bacteroidota
GCC
Gly
>WENV182201260
OHPM01000100
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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