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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182202617
OHPO01022759
155958
Bacillota
GAT
Ile
>WENV182202534
OHPO01014135
144612
Bacillota
TCT
Arg
>WENV182201958
OHPO01000415
154063
Bacillota
CGG
Pro
>WENV182202203
OHPO01002500
44854
Bacillota
TGA
Ser
>WENV182202335
OHPO01005125
235154
Bacillota
GTT
Asn
>WENV182202439
OHPO01008362
144577
Bacillota
GAT
Ile
>WENV182202564
OHPO01016415
59312
Bacillota
CAG
Leu
>WENV182202118
OHPO01001596
338147
Bacillota
CTC
Glu
>WENV182202716
OHPO01038101
235150
Bacillota
TGC
Ala
>WENV182202288
OHPO01004014
155273
Bacillota
CAT
Met
>WENV182201829
OHPO01000003
340802
Bacillota
TTG
Gln
>WENV182202277
OHPO01003851
182792
Bacillota
GTC
Asp
>WENV182202169
OHPO01002031
169927
Bacillota
GTC
Asp
>WENV182202356
OHPO01005557
44859
Bacillota
AAG
Leu
>WENV182202479
OHPO01009780
11034
Bacillota
GGA
Ser
>WENV182202276
OHPO01003851
235117
Bacillota
TAC
Val
>WENV182202728
OHPO01040771
247057
Bacillota
TGC
Ala
>WENV182202005
OHPO01000815
274189
Bacillota
TGT
Thr
>WENV182202182
OHPO01002181
274189
Bacillota
TGT
Thr
>WENV182202274
OHPO01003851
235079
Bacillota
GAA
Phe
>WENV182201975
OHPO01000545
257952
Bacillota
TGT
Thr
>WENV182202448
OHPO01008732
173314
Bacillota
GAT
Ile
>WENV182202290
OHPO01004047
338149
Bacillota
CTC
Glu
>WENV182202309
OHPO01004572
245298
Bacillota
CGG
Pro
>WENV182202514
OHPO01012189
37269
Bacillota
TGA
Ser
>WENV182202167
OHPO01002031
348433
Bacillota
TTC
Glu
>WENV182202706
OHPO01036491
152149
Bacillota
GTG
His
>WENV182202220
OHPO01002906
152492
Bacillota
GGG
Pro
>WENV182202308
OHPO01004572
411547
Bacillota
CTG
Gln
>WENV182202204
OHPO01002500
4624
Bacillota
GCT
Ser
>WENV182202278
OHPO01003851
235095
Bacillota
GGT
Thr
>WENV182202301
OHPO01004445
419945
Bacillota
GCA
Cys
>WENV182202804
OHPO01057174
154748
Bacillota
GTC
Asp
>WENV182202585
OHPO01018429
144962
Bacillota
CAT
Met
>WENV182202174
OHPO01002102
411549
Bacillota
TTG
Gln
>WENV182202041
OHPO01001103
235142
Bacillota
CTT
Lys
>WENV182202486
OHPO01010376
235142
Bacillota
CTT
Lys
>WENV182202358
OHPO01005626
148188
Bacillota
CCG
Arg
>WENV182202076
OHPO01001316
163943
Bacillota
GTC
Asp
>WENV182202421
OHPO01007644
235124
Bacillota
TGG
Pro
>WENV182202424
OHPO01007839
338129
Bacillota
TGT
Thr
>WENV182202405
OHPO01007218
157838
Bacillota
GTC
Asp
>WENV182202387
OHPO01006678
144583
Bacillota
ACG
Arg
>WENV182202410
OHPO01007288
247734
Bacillota
TGC
Ala
>WENV182202215
OHPO01002823
144621
Bacillota
GTT
Asn
>WENV182202352
OHPO01005448
235113
Bacillota
GAA
Phe
>WENV182202242
OHPO01003217
277200
Bacillota
GGC
Ala
>WENV182202171
OHPO01002077
58712
Bacillota
CAG
Leu
>WENV182202223
OHPO01002951
245296
Bacillota
CCC
Gly
>WENV182202291
OHPO01004047
272992
Bacillota
CTT
Lys
>WENV182202318
OHPO01004761
344240
Bacillota
GCC
Gly
>WENV182202388
OHPO01006773
248965
Bacillota
GCC
Gly
>WENV182202212
OHPO01002796
144594
Bacillota
CAC
Val
>WENV182202423
OHPO01007714
95563
Bacillota
GTA
Tyr
>WENV182201894
OHPO01000142
272488
Bacillota
GAA
Phe
>WENV182202519
OHPO01012609
272488
Bacillota
GAA
Phe
>WENV182202131
OHPO01001743
238945
Bacillota
GCC
Gly
>WENV182202275
OHPO01003851
249259
Bacillota
GCC
Gly
>WENV182202638
OHPO01024886
238857
Bacillota
CCA
Trp
>WENV182202399
OHPO01007081
273862
Bacillota
TGC
Ala
>WENV182202064
OHPO01001221
338128
Bacillota
TTC
Glu
>WENV182202315
OHPO01004623
338128
Bacillota
TTC
Glu
>WENV182202436
OHPO01008307
150669
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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