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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182209375
OHPZ01012512
119661
Verrucomicrobiota
CAA
Leu
>WENV182209336
OHPZ01008105
246701
Verrucomicrobiota
TTT
Lys
>WENV182209311
OHPZ01004797
345141
Verrucomicrobiota
TTG
Gln
>WENV182209378
OHPZ01013400
345133
Verrucomicrobiota
GAC
Val
>WENV182209411
OHPZ01018568
246677
Verrucomicrobiota
CTT
Lys
>WENV182209163
OHPZ01000682
344844
Verrucomicrobiota
GCA
Cys
>WENV182209283
OHPZ01003111
155264
Verrucomicrobiota
GGG
Pro
>WENV182209372
OHPZ01012397
344845
Verrucomicrobiota
CTG
Gln
>WENV182209353
OHPZ01009605
128202
Verrucomicrobiota
GTC
Asp
>WENV182209291
OHPZ01003563
46246
Verrucomicrobiota
TGA
Ser
>WENV182209339
OHPZ01008517
97755
Verrucomicrobiota
TAG
Leu
>WENV182209164
OHPZ01000682
246700
Verrucomicrobiota
TTC
Glu
>WENV182209410
OHPZ01018568
344842
Verrucomicrobiota
CGT
Thr
>WENV182209368
OHPZ01012200
170105
Verrucomicrobiota
CAT
Met
>WENV182209433
OHPZ01024794
344839
Verrucomicrobiota
GTG
His
>WENV182209282
OHPZ01003004
7256
Verrucomicrobiota
GCT
Ser
>WENV182209380
OHPZ01013905
345119
Verrucomicrobiota
TAC
Val
>WENV182209322
OHPZ01006887
368497
Verrucomicrobiota
GCC
Gly
>WENV182209428
OHPZ01022683
345142
Verrucomicrobiota
CCG
Arg
>WENV182209394
OHPZ01014940
246709
Verrucomicrobiota
CAT
Met
>WENV182209403
OHPZ01016953
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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