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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182211082
OHQE01022167
24650
Bacillota
TAA
Leu
>WENV182210865
OHQE01002840
144612
Bacillota
TCT
Arg
>WENV182210779
OHQE01001115
235098
Bacillota
GAC
Val
>WENV182210896
OHQE01003545
44854
Bacillota
TGA
Ser
>WENV182210700
OHQE01000402
37071
Bacillota
TGA
Ser
>WENV182210913
OHQE01003841
246023
Bacillota
TGC
Ala
>WENV182210726
OHQE01000592
59312
Bacillota
CAG
Leu
>WENV182211007
OHQE01010616
238910
Bacillota
CTT
Lys
>WENV182210659
OHQE01000171
338147
Bacillota
CTC
Glu
>WENV182210735
OHQE01000731
338147
Bacillota
CTC
Glu
>WENV182210808
OHQE01001724
235114
Bacillota
TTT
Lys
>WENV182210820
OHQE01001905
235091
Bacillota
CTT
Lys
>WENV182210725
OHQE01000592
44859
Bacillota
AAG
Leu
>WENV182210937
OHQE01004959
11034
Bacillota
GGA
Ser
>WENV182210924
OHQE01004299
247057
Bacillota
TGC
Ala
>WENV182211020
OHQE01012001
235079
Bacillota
GAA
Phe
>WENV182210819
OHQE01001905
338149
Bacillota
CTC
Glu
>WENV182211031
OHQE01012334
245298
Bacillota
CGG
Pro
>WENV182211116
OHQE01031217
152492
Bacillota
GGG
Pro
>WENV182210956
OHQE01005574
153911
Bacillota
GAT
Ile
>WENV182210806
OHQE01001724
144610
Bacillota
GTG
His
>WENV182211030
OHQE01012334
411547
Bacillota
CTG
Gln
>WENV182210897
OHQE01003545
4624
Bacillota
GCT
Ser
>WENV182211108
OHQE01028822
411549
Bacillota
TTG
Gln
>WENV182210771
OHQE01001001
235142
Bacillota
CTT
Lys
>WENV182210520
OHQE01000002
245386
Bacillota
CCA
Trp
>WENV182210736
OHQE01000750
148188
Bacillota
CCG
Arg
>WENV182210715
OHQE01000524
249522
Bacillota
TAC
Val
>WENV182210859
OHQE01002752
235124
Bacillota
TGG
Pro
>WENV182210904
OHQE01003684
144583
Bacillota
ACG
Arg
>WENV182210972
OHQE01006965
247734
Bacillota
TGC
Ala
>WENV182210876
OHQE01003035
235171
Bacillota
CCA
Trp
>WENV182210809
OHQE01001739
144621
Bacillota
GTT
Asn
>WENV182210772
OHQE01001009
144594
Bacillota
CAC
Val
>WENV182210653
OHQE01000150
95563
Bacillota
GTA
Tyr
>WENV182210588
OHQE01000037
338127
Bacillota
TTG
Gln
>WENV182210887
OHQE01003402
238945
Bacillota
GCC
Gly
>WENV182211021
OHQE01012001
249259
Bacillota
GCC
Gly
>WENV182210814
OHQE01001844
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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