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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182214711
OHQK01000049
235097
Bacteroidota
TTT
Lys
>WENV182214734
OHQK01000105
235097
Bacteroidota
TTT
Lys
>WENV182214743
OHQK01000178
235102
Bacteroidota
CGT
Thr
>WENV182214853
OHQK01006780
95618
Bacteroidota
TAG
Leu
>WENV182214747
OHQK01000191
415410
Bacteroidota
TTG
Gln
>WENV182214768
OHQK01000391
415410
Bacteroidota
TTG
Gln
>WENV182214808
OHQK01001180
411543
Bacteroidota
CTG
Gln
>WENV182214709
OHQK01000037
338124
Bacteroidota
CCG
Arg
>WENV182214835
OHQK01002918
126641
Bacteroidota
TAC
Val
>WENV182214697
OHQK01000005
338132
Bacteroidota
GCA
Cys
>WENV182214701
OHQK01000017
338132
Bacteroidota
GCA
Cys
>WENV182214889
OHQK01013163
144688
Bacteroidota
CAT
Met
>WENV182214878
OHQK01011103
144933
Bacteroidota
TCT
Arg
>WENV182214689
OHQK01000001
144656
Bacteroidota
GTG
His
>WENV182214740
OHQK01000147
235207
Bacteroidota
CAT
Met
>WENV182214710
OHQK01000046
144596
Bacteroidota
GGC
Ala
>WENV182214724
OHQK01000073
80607
Bacteroidota
GTA
Tyr
>WENV182214744
OHQK01000179
80607
Bacteroidota
GTA
Tyr
>WENV182214757
OHQK01000254
80607
Bacteroidota
GTA
Tyr
>WENV182214717
OHQK01000058
144590
Bacteroidota
GTT
Asn
>WENV182214718
OHQK01000058
144590
Bacteroidota
GTT
Asn
>WENV182214739
OHQK01000139
95559
Bacteroidota
TAG
Leu
>WENV182214728
OHQK01000084
419272
Bacteroidota
CTG
Gln
>WENV182214789
OHQK01000666
144655
Bacteroidota
GGC
Ala
>WENV182214904
OHQK01015197
338164
Bacteroidota
TTC
Glu
>WENV182214688
OHQK01000001
50727
Bacteroidota
TGA
Ser
>WENV182214708
OHQK01000036
50727
Bacteroidota
TGA
Ser
>WENV182214791
OHQK01000772
132360
Bacteroidota
GGG
Pro
>WENV182214741
OHQK01000160
425638
Bacteroidota
CTG
Gln
>WENV182214748
OHQK01000192
425638
Bacteroidota
CTG
Gln
>WENV182214840
OHQK01004410
185921
Bacteroidota
GTC
Asp
>WENV182214719
OHQK01000063
23696
Bacteroidota
GCT
Ser
>WENV182214690
OHQK01000001
16224
Bacteroidota
GGA
Ser
>WENV182214732
OHQK01000100
16220
Bacteroidota
GGA
Ser
>WENV182214706
OHQK01000030
338125
Bacteroidota
CCT
Arg
>WENV182214745
OHQK01000182
338125
Bacteroidota
CCT
Arg
>WENV182214770
OHQK01000437
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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