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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182217208
OHQO01003669
119661
Verrucomicrobiota
CAA
Leu
>WENV182217200
OHQO01003323
155256
Verrucomicrobiota
TCT
Arg
>WENV182217287
OHQO01006984
246701
Verrucomicrobiota
TTT
Lys
>WENV182217292
OHQO01007576
345141
Verrucomicrobiota
TTG
Gln
>WENV182217294
OHQO01007755
345133
Verrucomicrobiota
GAC
Val
>WENV182217274
OHQO01005833
82054
Verrucomicrobiota
GTA
Tyr
>WENV182217187
OHQO01003181
246677
Verrucomicrobiota
CTT
Lys
>WENV182217204
OHQO01003498
344844
Verrucomicrobiota
GCA
Cys
>WENV182217365
OHQO01014358
155264
Verrucomicrobiota
GGG
Pro
>WENV182217340
OHQO01011674
344845
Verrucomicrobiota
CTG
Gln
>WENV182217207
OHQO01003640
128202
Verrucomicrobiota
GTC
Asp
>WENV182217177
OHQO01002949
414625
Verrucomicrobiota
CCC
Gly
>WENV182217272
OHQO01005746
97755
Verrucomicrobiota
TAG
Leu
>WENV182217205
OHQO01003498
246700
Verrucomicrobiota
TTC
Glu
>WENV182217125
OHQO01001866
347038
Verrucomicrobiota
GCC
Gly
>WENV182217212
OHQO01003864
246687
Verrucomicrobiota
CGC
Ala
>WENV182217186
OHQO01003181
344842
Verrucomicrobiota
CGT
Thr
>WENV182217236
OHQO01004510
345123
Verrucomicrobiota
TGT
Thr
>WENV182217326
OHQO01010192
345110
Verrucomicrobiota
CCT
Arg
>WENV182217252
OHQO01005104
344839
Verrucomicrobiota
GTG
His
>WENV182217175
OHQO01002810
7274
Verrucomicrobiota
CGA
Ser
>WENV182217332
OHQO01010358
246260
Verrucomicrobiota
>WENV182217159
OHQO01002487
155268
Verrucomicrobiota
CGG
Pro
>WENV182217258
OHQO01005223
82181
Verrucomicrobiota
AAG
Leu
>WENV182217405
OHQO01022835
246728
Verrucomicrobiota
GAA
Phe
>WENV182217249
OHQO01005000
7256
Verrucomicrobiota
GCT
Ser
>WENV182217260
OHQO01005283
345115
Verrucomicrobiota
CAT
Met
>WENV182217308
OHQO01008559
345119
Verrucomicrobiota
TAC
Val
>WENV182217226
OHQO01004304
345124
Verrucomicrobiota
GTT
Asn
>WENV182217107
OHQO01001639
17023
Verrucomicrobiota
GGA
Ser
>WENV182217222
OHQO01004266
345142
Verrucomicrobiota
CCG
Arg
>WENV182217406
OHQO01022835
154693
Verrucomicrobiota
TGG
Pro
>WENV182217381
OHQO01016323
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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