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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182222468
OHQX01008654
119661
Verrucomicrobiota
CAA
Leu
>WENV182222529
OHQX01019446
246701
Verrucomicrobiota
TTT
Lys
>WENV182222443
OHQX01006071
345141
Verrucomicrobiota
TTG
Gln
>WENV182222461
OHQX01006528
345133
Verrucomicrobiota
GAC
Val
>WENV182222534
OHQX01021141
155264
Verrucomicrobiota
GGG
Pro
>WENV182222547
OHQX01025267
344845
Verrucomicrobiota
CTG
Gln
>WENV182222477
OHQX01009552
128202
Verrucomicrobiota
GTC
Asp
>WENV182222421
OHQX01004692
46246
Verrucomicrobiota
TGA
Ser
>WENV182222414
OHQX01004188
246700
Verrucomicrobiota
TTC
Glu
>WENV182222490
OHQX01012268
246687
Verrucomicrobiota
CGC
Ala
>WENV182222353
OHQX01001964
419909
Verrucomicrobiota
TCC
Gly
>WENV182222486
OHQX01011576
82056
Verrucomicrobiota
TAA
Leu
>WENV182222475
OHQX01009361
344842
Verrucomicrobiota
CGT
Thr
>WENV182222440
OHQX01005690
345123
Verrucomicrobiota
TGT
Thr
>WENV182222458
OHQX01006340
344839
Verrucomicrobiota
GTG
His
>WENV182222467
OHQX01008391
155268
Verrucomicrobiota
CGG
Pro
>WENV182222396
OHQX01003195
246728
Verrucomicrobiota
GAA
Phe
>WENV182222478
OHQX01009635
345124
Verrucomicrobiota
GTT
Asn
>WENV182222420
OHQX01004669
368497
Verrucomicrobiota
GCC
Gly
>WENV182222518
OHQX01016882
246709
Verrucomicrobiota
CAT
Met
>WENV182222397
OHQX01003195
154693
Verrucomicrobiota
TGG
Pro
>WENV182222459
OHQX01006425
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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