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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182232269
OHRN01009452
144612
Bacillota
TCT
Arg
>WENV182232011
OHRN01000243
235098
Bacillota
GAC
Val
>WENV182232153
OHRN01002653
338152
Bacillota
TTC
Glu
>WENV182232231
OHRN01006800
338152
Bacillota
TTC
Glu
>WENV182232146
OHRN01002413
44854
Bacillota
TGA
Ser
>WENV182232124
OHRN01001601
37071
Bacillota
TGA
Ser
>WENV182231948
OHRN01000041
59312
Bacillota
CAG
Leu
>WENV182232221
OHRN01005978
238910
Bacillota
CTT
Lys
>WENV182232091
OHRN01001070
245370
Bacillota
TGT
Thr
>WENV182232013
OHRN01000245
338147
Bacillota
CTC
Glu
>WENV182232045
OHRN01000512
338147
Bacillota
CTC
Glu
>WENV182232012
OHRN01000244
235114
Bacillota
TTT
Lys
>WENV182231963
OHRN01000068
235091
Bacillota
CTT
Lys
>WENV182232102
OHRN01001135
44859
Bacillota
AAG
Leu
>WENV182232061
OHRN01000662
11034
Bacillota
GGA
Ser
>WENV182232194
OHRN01004261
235079
Bacillota
GAA
Phe
>WENV182232046
OHRN01000539
338149
Bacillota
CTC
Glu
>WENV182232056
OHRN01000618
245298
Bacillota
CGG
Pro
>WENV182232256
OHRN01007983
245298
Bacillota
CGG
Pro
>WENV182232273
OHRN01009493
153911
Bacillota
GAT
Ile
>WENV182231989
OHRN01000155
411547
Bacillota
CTG
Gln
>WENV182232055
OHRN01000618
411547
Bacillota
CTG
Gln
>WENV182232255
OHRN01007983
411547
Bacillota
CTG
Gln
>WENV182232147
OHRN01002413
4624
Bacillota
GCT
Ser
>WENV182232022
OHRN01000331
235095
Bacillota
GGT
Thr
>WENV182231988
OHRN01000147
411549
Bacillota
TTG
Gln
>WENV182232052
OHRN01000575
235142
Bacillota
CTT
Lys
>WENV182232133
OHRN01002024
245386
Bacillota
CCA
Trp
>WENV182232101
OHRN01001134
148188
Bacillota
CCG
Arg
>WENV182232247
OHRN01007591
148188
Bacillota
CCG
Arg
>WENV182232232
OHRN01006800
241432
Bacillota
TGT
Thr
>WENV182232066
OHRN01000703
235124
Bacillota
TGG
Pro
>WENV182232068
OHRN01000765
338129
Bacillota
TGT
Thr
>WENV182232077
OHRN01000894
144583
Bacillota
ACG
Arg
>WENV182232175
OHRN01003432
144652
Bacillota
GTC
Asp
>WENV182231959
OHRN01000060
144621
Bacillota
GTT
Asn
>WENV182232047
OHRN01000539
144621
Bacillota
GTT
Asn
>WENV182232075
OHRN01000847
235113
Bacillota
GAA
Phe
>WENV182232094
OHRN01001070
243098
Bacillota
GGT
Thr
>WENV182232078
OHRN01000895
58712
Bacillota
CAG
Leu
>WENV182232210
OHRN01005352
58712
Bacillota
CAG
Leu
>WENV182232130
OHRN01001967
245296
Bacillota
CCC
Gly
>WENV182232151
OHRN01002614
344240
Bacillota
GCC
Gly
>WENV182232036
OHRN01000410
144594
Bacillota
CAC
Val
>WENV182232007
OHRN01000216
95563
Bacillota
GTA
Tyr
>WENV182232205
OHRN01005078
114075
Bacillota
TAG
Leu
>WENV182232189
OHRN01003705
238945
Bacillota
GCC
Gly
>WENV182232041
OHRN01000474
249259
Bacillota
GCC
Gly
>WENV182232033
OHRN01000382
338128
Bacillota
TTC
Glu
>WENV182232082
OHRN01000976
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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