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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182232429
OHRO01000595
235102
Bacteroidota
CGT
Thr
>WENV182232567
OHRO01004428
243025
Bacteroidota
CAT
Met
>WENV182232708
OHRO01027497
338155
Bacteroidota
CTC
Glu
>WENV182232369
OHRO01000110
415410
Bacteroidota
TTG
Gln
>WENV182232602
OHRO01007878
136244
Bacteroidota
TAC
Val
>WENV182232400
OHRO01000352
338132
Bacteroidota
GCA
Cys
>WENV182232520
OHRO01002405
193809
Bacteroidota
CAT
Met
>WENV182232396
OHRO01000316
301449
Bacteroidota
CGG
Pro
>WENV182232509
OHRO01001845
144656
Bacteroidota
GTG
His
>WENV182232585
OHRO01006393
80607
Bacteroidota
GTA
Tyr
>WENV182232550
OHRO01003952
16999
Bacteroidota
GGA
Ser
>WENV182232499
OHRO01001612
52358
Bacteroidota
TGA
Ser
>WENV182232650
OHRO01013274
52358
Bacteroidota
TGA
Ser
>WENV182232379
OHRO01000148
154643
Bacteroidota
CAT
Met
>WENV182232453
OHRO01000857
144590
Bacteroidota
GTT
Asn
>WENV182232404
OHRO01000391
95559
Bacteroidota
TAG
Leu
>WENV182232583
OHRO01006247
144655
Bacteroidota
GGC
Ala
>WENV182232371
OHRO01000123
44852
Bacteroidota
TAA
Leu
>WENV182232615
OHRO01008717
150485
Bacteroidota
GTT
Asn
>WENV182232601
OHRO01007286
132360
Bacteroidota
GGG
Pro
>WENV182232387
OHRO01000249
425638
Bacteroidota
CTG
Gln
>WENV182232442
OHRO01000726
353927
Bacteroidota
TTC
Glu
>WENV182232537
OHRO01003266
16220
Bacteroidota
GGA
Ser
>WENV182232528
OHRO01002772
338125
Bacteroidota
CCT
Arg
>WENV182232684
OHRO01020767
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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