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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182235175
OHRS01010840
155256
Verrucomicrobiota
TCT
Arg
>WENV182235152
OHRS01007753
246701
Verrucomicrobiota
TTT
Lys
>WENV182235186
OHRS01012131
345141
Verrucomicrobiota
TTG
Gln
>WENV182235162
OHRS01009217
344844
Verrucomicrobiota
GCA
Cys
>WENV182235220
OHRS01015632
155264
Verrucomicrobiota
GGG
Pro
>WENV182235080
OHRS01004394
344845
Verrucomicrobiota
CTG
Gln
>WENV182235249
OHRS01020560
128202
Verrucomicrobiota
GTC
Asp
>WENV182235193
OHRS01013061
414625
Verrucomicrobiota
CCC
Gly
>WENV182235138
OHRS01006415
46246
Verrucomicrobiota
TGA
Ser
>WENV182235199
OHRS01013649
97755
Verrucomicrobiota
TAG
Leu
>WENV182234997
OHRS01002163
246700
Verrucomicrobiota
TTC
Glu
>WENV182235014
OHRS01002502
246687
Verrucomicrobiota
CGC
Ala
>WENV182235192
OHRS01013061
419909
Verrucomicrobiota
TCC
Gly
>WENV182235055
OHRS01003528
60880
Verrucomicrobiota
CAG
Leu
>WENV182234983
OHRS01001817
170105
Verrucomicrobiota
CAT
Met
>WENV182235003
OHRS01002277
344839
Verrucomicrobiota
GTG
His
>WENV182234834
OHRS01000544
7274
Verrucomicrobiota
CGA
Ser
>WENV182234939
OHRS01001198
246260
Verrucomicrobiota
>WENV182235079
OHRS01004385
155268
Verrucomicrobiota
CGG
Pro
>WENV182235100
OHRS01005329
246728
Verrucomicrobiota
GAA
Phe
>WENV182234940
OHRS01001198
7256
Verrucomicrobiota
GCT
Ser
>WENV182235115
OHRS01005683
345115
Verrucomicrobiota
CAT
Met
>WENV182235090
OHRS01004686
345124
Verrucomicrobiota
GTT
Asn
>WENV182235037
OHRS01003001
17023
Verrucomicrobiota
GGA
Ser
>WENV182235064
OHRS01003692
368497
Verrucomicrobiota
GCC
Gly
>WENV182235076
OHRS01004241
345142
Verrucomicrobiota
CCG
Arg
>WENV182235004
OHRS01002277
246709
Verrucomicrobiota
CAT
Met
>WENV182235101
OHRS01005329
154693
Verrucomicrobiota
TGG
Pro
>WENV182234989
OHRS01002036
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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