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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182238976
OHSA01000774
155256
Verrucomicrobiota
TCT
Arg
>WENV182239109
OHSA01003354
246701
Verrucomicrobiota
TTT
Lys
>WENV182239228
OHSA01010061
345133
Verrucomicrobiota
GAC
Val
>WENV182239171
OHSA01005704
82054
Verrucomicrobiota
GTA
Tyr
>WENV182239160
OHSA01005385
246677
Verrucomicrobiota
CTT
Lys
>WENV182239161
OHSA01005385
246677
Verrucomicrobiota
CTT
Lys
>WENV182239037
OHSA01001678
344844
Verrucomicrobiota
GCA
Cys
>WENV182239150
OHSA01005100
155264
Verrucomicrobiota
GGG
Pro
>WENV182239092
OHSA01002898
344845
Verrucomicrobiota
CTG
Gln
>WENV182239100
OHSA01003054
128202
Verrucomicrobiota
GTC
Asp
>WENV182238972
OHSA01000704
46246
Verrucomicrobiota
TGA
Ser
>WENV182239028
OHSA01001502
97755
Verrucomicrobiota
TAG
Leu
>WENV182239038
OHSA01001678
246700
Verrucomicrobiota
TTC
Glu
>WENV182239086
OHSA01002762
246687
Verrucomicrobiota
CGC
Ala
>WENV182239012
OHSA01001235
419909
Verrucomicrobiota
TCC
Gly
>WENV182239244
OHSA01012054
344841
Verrucomicrobiota
CAC
Val
>WENV182239136
OHSA01004473
82056
Verrucomicrobiota
TAA
Leu
>WENV182239093
OHSA01002919
344842
Verrucomicrobiota
CGT
Thr
>WENV182239174
OHSA01006005
170105
Verrucomicrobiota
CAT
Met
>WENV182239124
OHSA01004120
345123
Verrucomicrobiota
TGT
Thr
>WENV182239103
OHSA01003113
345110
Verrucomicrobiota
CCT
Arg
>WENV182239193
OHSA01007418
344839
Verrucomicrobiota
GTG
His
>WENV182239048
OHSA01001953
7274
Verrucomicrobiota
CGA
Ser
>WENV182239024
OHSA01001438
246260
Verrucomicrobiota
>WENV182239113
OHSA01003519
155268
Verrucomicrobiota
CGG
Pro
>WENV182239201
OHSA01007738
7256
Verrucomicrobiota
GCT
Ser
>WENV182239019
OHSA01001340
345115
Verrucomicrobiota
CAT
Met
>WENV182239148
OHSA01004987
345119
Verrucomicrobiota
TAC
Val
>WENV182239091
OHSA01002846
345124
Verrucomicrobiota
GTT
Asn
>WENV182239015
OHSA01001275
368497
Verrucomicrobiota
GCC
Gly
>WENV182239187
OHSA01006868
345142
Verrucomicrobiota
CCG
Arg
>WENV182239147
OHSA01004986
246709
Verrucomicrobiota
CAT
Met
>WENV182238913
OHSA01000256
154693
Verrucomicrobiota
TGG
Pro
>WENV182239183
OHSA01006475
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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