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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182240175
OHSE01001008
235097
Bacteroidota
TTT
Lys
>WENV182240061
OHSE01000163
95987
Bacteroidota
CAA
Leu
>WENV182239943
OHSE01000024
339412
Bacteroidota
GGT
Thr
>WENV182240206
OHSE01001441
235102
Bacteroidota
CGT
Thr
>WENV182240360
OHSE01004917
267954
Bacteroidota
GCC
Gly
>WENV182240606
OHSE01025111
243025
Bacteroidota
CAT
Met
>WENV182239978
OHSE01000059
97336
Bacteroidota
CAG
Leu
>WENV182240278
OHSE01002960
48053
Bacteroidota
TGA
Ser
>WENV182239922
OHSE01000018
413663
Bacteroidota
CTG
Gln
>WENV182239923
OHSE01000018
413663
Bacteroidota
CTG
Gln
>WENV182240019
OHSE01000089
415410
Bacteroidota
TTG
Gln
>WENV182239944
OHSE01000024
237797
Bacteroidota
CCA
Trp
>WENV182239921
OHSE01000016
412479
Bacteroidota
TTG
Gln
>WENV182240051
OHSE01000140
147147
Bacteroidota
GTG
His
>WENV182240052
OHSE01000140
147147
Bacteroidota
GTG
His
>WENV182240156
OHSE01000719
341950
Bacteroidota
>WENV182240562
OHSE01018839
338132
Bacteroidota
GCA
Cys
>WENV182239919
OHSE01000016
37076
Bacteroidota
TAA
Leu
>WENV182240213
OHSE01001502
144656
Bacteroidota
GTG
His
>WENV182240111
OHSE01000332
235207
Bacteroidota
CAT
Met
>WENV182240661
OHSE01036207
80607
Bacteroidota
GTA
Tyr
>WENV182240024
OHSE01000094
344769
Bacteroidota
CTC
Glu
>WENV182240025
OHSE01000094
344769
Bacteroidota
CTC
Glu
>WENV182240492
OHSE01013958
154643
Bacteroidota
CAT
Met
>WENV182240569
OHSE01019673
175704
Bacteroidota
TGC
Ala
>WENV182240106
OHSE01000288
144590
Bacteroidota
GTT
Asn
>WENV182240157
OHSE01000723
95559
Bacteroidota
TAG
Leu
>WENV182240059
OHSE01000151
419272
Bacteroidota
CTG
Gln
>WENV182240268
OHSE01002657
240012
Bacteroidota
CCC
Gly
>WENV182240238
OHSE01002028
44852
Bacteroidota
TAA
Leu
>WENV182240705
OHSE01047623
150485
Bacteroidota
GTT
Asn
>WENV182240145
OHSE01000690
132360
Bacteroidota
GGG
Pro
>WENV182240366
OHSE01005212
353927
Bacteroidota
TTC
Glu
>WENV182240418
OHSE01008174
353927
Bacteroidota
TTC
Glu
>WENV182240599
OHSE01024183
414426
Bacteroidota
CTG
Gln
>WENV182240259
OHSE01002552
16224
Bacteroidota
GGA
Ser
>WENV182240203
OHSE01001407
151960
Bacteroidota
GGC
Ala
>WENV182240277
OHSE01002892
151960
Bacteroidota
GGC
Ala
>WENV182240191
OHSE01001101
16220
Bacteroidota
GGA
Ser
>WENV182240260
OHSE01002553
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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