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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182243128
OHSH01030666
309417
Bacillota
GGC
Ala
>WENV182242624
OHSH01000426
158247
Bacillota
>WENV182242654
OHSH01000595
37213
Bacillota
TGA
Ser
>WENV182242671
OHSH01000767
144612
Bacillota
TCT
Arg
>WENV182242386
OHSH01000008
339890
Bacillota
TTG
Gln
>WENV182242745
OHSH01001834
235098
Bacillota
GAC
Val
>WENV182243022
OHSH01016752
235098
Bacillota
GAC
Val
>WENV182242613
OHSH01000383
340263
Bacillota
TTC
Glu
>WENV182242615
OHSH01000386
44854
Bacillota
TGA
Ser
>WENV182243222
OHSH01053763
148348
Bacillota
GTC
Asp
>WENV182242365
OHSH01000001
307003
Bacillota
TGC
Ala
>WENV182242607
OHSH01000358
59312
Bacillota
CAG
Leu
>WENV182242715
OHSH01001317
239080
Bacillota
CTG
Gln
>WENV182243045
OHSH01019434
238910
Bacillota
CTT
Lys
>WENV182242482
OHSH01000081
338147
Bacillota
CTC
Glu
>WENV182242483
OHSH01000081
338147
Bacillota
CTC
Glu
>WENV182242497
OHSH01000102
338147
Bacillota
CTC
Glu
>WENV182242549
OHSH01000170
338147
Bacillota
CTC
Glu
>WENV182242617
OHSH01000392
338147
Bacillota
CTC
Glu
>WENV182242664
OHSH01000698
338147
Bacillota
CTC
Glu
>WENV182242952
OHSH01010039
235150
Bacillota
TGC
Ala
>WENV182242839
OHSH01004118
340802
Bacillota
TTG
Gln
>WENV182242572
OHSH01000206
293599
Bacillota
CTT
Lys
>WENV182242507
OHSH01000111
235114
Bacillota
TTT
Lys
>WENV182242651
OHSH01000575
429429
Bacillota
CCA
Trp
>WENV182242410
OHSH01000019
313454
Bacillota
GAA
Phe
>WENV182243043
OHSH01019204
41154
Bacillota
TAA
Leu
>WENV182242548
OHSH01000169
44859
Bacillota
AAG
Leu
>WENV182242642
OHSH01000523
11034
Bacillota
GGA
Ser
>WENV182243223
OHSH01053763
239076
Bacillota
GAA
Phe
>WENV182242838
OHSH01004118
156937
Bacillota
GTG
His
>WENV182242646
OHSH01000530
296878
Bacillota
GTT
Asn
>WENV182242871
OHSH01005519
340265
Bacillota
GCC
Gly
>WENV182242725
OHSH01001438
338149
Bacillota
CTC
Glu
>WENV182242804
OHSH01003326
338149
Bacillota
CTC
Glu
>WENV182242686
OHSH01000943
271471
Bacillota
GCC
Gly
>WENV182242696
OHSH01001040
245298
Bacillota
CGG
Pro
>WENV182242500
OHSH01000106
287000
Bacillota
GTT
Asn
>WENV182242501
OHSH01000106
287000
Bacillota
GTT
Asn
>WENV182242409
OHSH01000019
169968
Bacillota
CAT
Met
>WENV182243235
OHSH01057321
152149
Bacillota
GTG
His
>WENV182243230
OHSH01055733
152492
Bacillota
GGG
Pro
>WENV182242547
OHSH01000168
100326
Bacillota
GTA
Tyr
>WENV182242505
OHSH01000111
144610
Bacillota
GTG
His
>WENV182242695
OHSH01001040
411547
Bacillota
CTG
Gln
>WENV182242714
OHSH01001296
411547
Bacillota
CTG
Gln
>WENV182242729
OHSH01001502
411547
Bacillota
CTG
Gln
>WENV182243217
OHSH01052551
147684
Bacillota
ACG
Arg
>WENV182242616
OHSH01000386
4624
Bacillota
GCT
Ser
>WENV182242673
OHSH01000768
235095
Bacillota
GGT
Thr
>WENV182242614
OHSH01000383
304759
Bacillota
TAC
Val
>WENV182242635
OHSH01000476
411549
Bacillota
TTG
Gln
>WENV182242581
OHSH01000233
235142
Bacillota
CTT
Lys
>WENV182242801
OHSH01003076
148188
Bacillota
CCG
Arg
>WENV182242896
OHSH01006631
80612
Bacillota
GTA
Tyr
>WENV182242988
OHSH01013541
163943
Bacillota
GTC
Asp
>WENV182242978
OHSH01012525
298620
Bacillota
CAT
Met
>WENV182242767
OHSH01002216
235124
Bacillota
TGG
Pro
>WENV182242924
OHSH01007833
235124
Bacillota
TGG
Pro
>WENV182242869
OHSH01005433
338129
Bacillota
TGT
Thr
>WENV182242859
OHSH01004782
157838
Bacillota
GTC
Asp
>WENV182242795
OHSH01003049
144583
Bacillota
ACG
Arg
>WENV182242846
OHSH01004248
144583
Bacillota
ACG
Arg
>WENV182243078
OHSH01024331
247734
Bacillota
TGC
Ala
>WENV182243116
OHSH01029604
235171
Bacillota
CCA
Trp
>WENV182242726
OHSH01001438
144621
Bacillota
GTT
Asn
>WENV182242805
OHSH01003326
144621
Bacillota
GTT
Asn
>WENV182242473
OHSH01000070
235113
Bacillota
GAA
Phe
>WENV182242965
OHSH01011008
58712
Bacillota
CAG
Leu
>WENV182242771
OHSH01002293
272992
Bacillota
CTT
Lys
>WENV182242612
OHSH01000383
239078
Bacillota
TTT
Lys
>WENV182242874
OHSH01005747
144594
Bacillota
CAC
Val
>WENV182242517
OHSH01000124
95563
Bacillota
GTA
Tyr
>WENV182243009
OHSH01015495
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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