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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182253953
OHTB01000165
243025
Bacteroidota
CAT
Met
>WENV182253978
OHTB01000248
338155
Bacteroidota
CTC
Glu
>WENV182253883
OHTB01000034
343138
Bacteroidota
CCT
Arg
>WENV182254443
OHTB01015301
46165
Bacteroidota
TGA
Ser
>WENV182254573
OHTB01033040
17323
Bacteroidota
GGA
Ser
>WENV182253993
OHTB01000303
95618
Bacteroidota
TAG
Leu
>WENV182254397
OHTB01009964
95618
Bacteroidota
TAG
Leu
>WENV182254355
OHTB01007227
338486
Bacteroidota
CAT
Met
>WENV182254232
OHTB01002444
411543
Bacteroidota
CTG
Gln
>WENV182254293
OHTB01003973
59689
Bacteroidota
CAG
Leu
>WENV182254143
OHTB01001096
436206
Bacteroidota
TTG
Gln
>WENV182254407
OHTB01010942
20893
Bacteroidota
GGA
Ser
>WENV182254409
OHTB01011032
344692
Bacteroidota
GGT
Thr
>WENV182254212
OHTB01001965
235182
Bacteroidota
>WENV182254173
OHTB01001439
272983
Bacteroidota
CGT
Thr
>WENV182253880
OHTB01000030
146800
Bacteroidota
>WENV182254196
OHTB01001706
126641
Bacteroidota
TAC
Val
>WENV182254114
OHTB01000897
338132
Bacteroidota
GCA
Cys
>WENV182254274
OHTB01003407
144688
Bacteroidota
CAT
Met
>WENV182254303
OHTB01004644
181746
Bacteroidota
GGC
Ala
>WENV182254395
OHTB01009726
58714
Bacteroidota
CAA
Leu
>WENV182253866
OHTB01000016
301449
Bacteroidota
CGG
Pro
>WENV182253974
OHTB01000233
301449
Bacteroidota
CGG
Pro
>WENV182254101
OHTB01000757
144933
Bacteroidota
TCT
Arg
>WENV182254197
OHTB01001743
235207
Bacteroidota
CAT
Met
>WENV182254307
OHTB01004815
144659
Bacteroidota
GTG
His
>WENV182254262
OHTB01003011
80614
Bacteroidota
>WENV182254058
OHTB01000521
154643
Bacteroidota
CAT
Met
>WENV182254308
OHTB01004877
154643
Bacteroidota
CAT
Met
>WENV182254067
OHTB01000573
175704
Bacteroidota
TGC
Ala
>WENV182254438
OHTB01014374
151121
Bacteroidota
CAT
Met
>WENV182254525
OHTB01023740
338314
Bacteroidota
CCT
Arg
>WENV182253881
OHTB01000031
139743
Bacteroidota
GGG
Pro
>WENV182254482
OHTB01018877
240012
Bacteroidota
CCC
Gly
>WENV182254509
OHTB01022266
147439
Bacteroidota
TCT
Arg
>WENV182253920
OHTB01000095
19528
Bacteroidota
GGA
Ser
>WENV182253843
OHTB01000002
425638
Bacteroidota
CTG
Gln
>WENV182254011
OHTB01000390
425638
Bacteroidota
CTG
Gln
>WENV182254154
OHTB01001158
425638
Bacteroidota
CTG
Gln
>WENV182254105
OHTB01000765
239647
Bacteroidota
TTT
Lys
>WENV182254272
OHTB01003375
239647
Bacteroidota
TTT
Lys
>WENV182254282
OHTB01003662
239647
Bacteroidota
TTT
Lys
>WENV182253990
OHTB01000294
19317
Bacteroidota
GGA
Ser
>WENV182254040
OHTB01000460
353927
Bacteroidota
TTC
Glu
>WENV182253909
OHTB01000071
185921
Bacteroidota
GTC
Asp
>WENV182254394
OHTB01009530
146530
Bacteroidota
TGT
Thr
>WENV182254312
OHTB01005124
139062
Bacteroidota
TGG
Pro
>WENV182253872
OHTB01000021
414426
Bacteroidota
CTG
Gln
>WENV182253959
OHTB01000190
55270
Bacteroidota
TGA
Ser
>WENV182254439
OHTB01014664
151960
Bacteroidota
GGC
Ala
>WENV182254292
OHTB01003973
235129
Bacteroidota
GCC
Gly
>WENV182253947
OHTB01000142
411629
Bacteroidota
TTG
Gln
>WENV182253981
OHTB01000260
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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