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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182257465
OHTF01025498
144612
Bacillota
TCT
Arg
>WENV182256902
OHTF01000460
235134
Bacillota
GAA
Phe
>WENV182257150
OHTF01003965
235098
Bacillota
GAC
Val
>WENV182257365
OHTF01016533
338152
Bacillota
TTC
Glu
>WENV182257343
OHTF01014104
44854
Bacillota
TGA
Ser
>WENV182257056
OHTF01001876
59312
Bacillota
CAG
Leu
>WENV182257072
OHTF01002147
238910
Bacillota
CTT
Lys
>WENV182256851
OHTF01000282
245370
Bacillota
TGT
Thr
>WENV182257208
OHTF01006709
235150
Bacillota
TGC
Ala
>WENV182257531
OHTF01036155
235294
Bacillota
TGC
Ala
>WENV182257446
OHTF01023830
11034
Bacillota
GGA
Ser
>WENV182257201
OHTF01006276
235079
Bacillota
GAA
Phe
>WENV182257360
OHTF01016235
338149
Bacillota
CTC
Glu
>WENV182257379
OHTF01017625
245298
Bacillota
CGG
Pro
>WENV182256832
OHTF01000224
152149
Bacillota
GTG
His
>WENV182256903
OHTF01000460
240017
Bacillota
GCC
Gly
>WENV182257378
OHTF01017625
411547
Bacillota
CTG
Gln
>WENV182257344
OHTF01014104
4624
Bacillota
GCT
Ser
>WENV182257145
OHTF01003831
18852
Bacillota
GCT
Ser
>WENV182257225
OHTF01007358
235095
Bacillota
GGT
Thr
>WENV182257295
OHTF01010671
411549
Bacillota
TTG
Gln
>WENV182257619
OHTF01057482
148188
Bacillota
CCG
Arg
>WENV182257161
OHTF01004278
147674
Bacillota
TCT
Arg
>WENV182257546
OHTF01038689
338129
Bacillota
TGT
Thr
>WENV182256884
OHTF01000396
157838
Bacillota
GTC
Asp
>WENV182257134
OHTF01003688
144583
Bacillota
ACG
Arg
>WENV182257478
OHTF01027800
247734
Bacillota
TGC
Ala
>WENV182257603
OHTF01053308
235171
Bacillota
CCA
Trp
>WENV182257361
OHTF01016235
144621
Bacillota
GTT
Asn
>WENV182256854
OHTF01000282
243098
Bacillota
GGT
Thr
>WENV182257172
OHTF01004938
58712
Bacillota
CAG
Leu
>WENV182257527
OHTF01035410
245296
Bacillota
CCC
Gly
>WENV182257171
OHTF01004889
272992
Bacillota
CTT
Lys
>WENV182256948
OHTF01000671
344240
Bacillota
GCC
Gly
>WENV182257315
OHTF01011753
178024
Bacillota
TCT
Arg
>WENV182257192
OHTF01005894
144594
Bacillota
CAC
Val
>WENV182257064
OHTF01001949
272488
Bacillota
GAA
Phe
>WENV182257194
OHTF01006013
272488
Bacillota
GAA
Phe
>WENV182257332
OHTF01013317
238945
Bacillota
GCC
Gly
>WENV182257050
OHTF01001802
249259
Bacillota
GCC
Gly
>WENV182256883
OHTF01000396
263523
Bacillota
TAC
Val
>WENV182257633
OHTF01062355
338131
Bacillota
GCC
Gly
>WENV182257138
OHTF01003737
338128
Bacillota
TTC
Glu
>WENV182257178
OHTF01005167
338128
Bacillota
TTC
Glu
>WENV182257242
OHTF01008037
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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