This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182256999
OHTF01001240
119661
Verrucomicrobiota
CAA
Leu
>WENV182256934
OHTF01000620
155256
Verrucomicrobiota
TCT
Arg
>WENV182256821
OHTF01000191
246701
Verrucomicrobiota
TTT
Lys
>WENV182257345
OHTF01014270
345141
Verrucomicrobiota
TTG
Gln
>WENV182256987
OHTF01001102
345133
Verrucomicrobiota
GAC
Val
>WENV182256749
OHTF01000071
82054
Verrucomicrobiota
GTA
Tyr
>WENV182257022
OHTF01001354
246677
Verrucomicrobiota
CTT
Lys
>WENV182257551
OHTF01039330
344844
Verrucomicrobiota
GCA
Cys
>WENV182256971
OHTF01000932
155264
Verrucomicrobiota
GGG
Pro
>WENV182257293
OHTF01010604
344845
Verrucomicrobiota
CTG
Gln
>WENV182257085
OHTF01002271
128202
Verrucomicrobiota
GTC
Asp
>WENV182256935
OHTF01000621
414625
Verrucomicrobiota
CCC
Gly
>WENV182256990
OHTF01001132
97755
Verrucomicrobiota
TAG
Leu
>WENV182256996
OHTF01001178
246700
Verrucomicrobiota
TTC
Glu
>WENV182256959
OHTF01000811
347038
Verrucomicrobiota
GCC
Gly
>WENV182256949
OHTF01000678
246687
Verrucomicrobiota
CGC
Ala
>WENV182256936
OHTF01000621
419909
Verrucomicrobiota
TCC
Gly
>WENV182257053
OHTF01001817
344841
Verrucomicrobiota
CAC
Val
>WENV182256844
OHTF01000266
60880
Verrucomicrobiota
CAG
Leu
>WENV182257021
OHTF01001354
344842
Verrucomicrobiota
CGT
Thr
>WENV182256920
OHTF01000550
170105
Verrucomicrobiota
CAT
Met
>WENV182256887
OHTF01000406
345123
Verrucomicrobiota
TGT
Thr
>WENV182256979
OHTF01001037
345110
Verrucomicrobiota
CCT
Arg
>WENV182257057
OHTF01001893
344839
Verrucomicrobiota
GTG
His
>WENV182256953
OHTF01000771
7274
Verrucomicrobiota
CGA
Ser
>WENV182256913
OHTF01000537
246260
Verrucomicrobiota
>WENV182256958
OHTF01000795
155268
Verrucomicrobiota
CGG
Pro
>WENV182257264
OHTF01009052
246728
Verrucomicrobiota
GAA
Phe
>WENV182256914
OHTF01000537
7256
Verrucomicrobiota
GCT
Ser
>WENV182257005
OHTF01001321
345119
Verrucomicrobiota
TAC
Val
>WENV182256748
OHTF01000071
345124
Verrucomicrobiota
GTT
Asn
>WENV182256857
OHTF01000293
17023
Verrucomicrobiota
GGA
Ser
>WENV182257097
OHTF01002793
345142
Verrucomicrobiota
CCG
Arg
>WENV182257058
OHTF01001893
246709
Verrucomicrobiota
CAT
Met
>WENV182257265
OHTF01009052
154693
Verrucomicrobiota
TGG
Pro
>WENV182257355
OHTF01015957
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK