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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182262999
OHTO01002816
235098
Bacillota
GAC
Val
>WENV182263111
OHTO01010823
429429
Bacillota
CCA
Trp
>WENV182263106
OHTO01010649
274189
Bacillota
TGT
Thr
>WENV182263048
OHTO01004774
235079
Bacillota
GAA
Phe
>WENV182263096
OHTO01009546
173314
Bacillota
GAT
Ile
>WENV182263064
OHTO01006893
338149
Bacillota
CTC
Glu
>WENV182263132
OHTO01014759
245298
Bacillota
CGG
Pro
>WENV182262930
OHTO01000668
169968
Bacillota
CAT
Met
>WENV182263157
OHTO01019437
152149
Bacillota
GTG
His
>WENV182263173
OHTO01023547
153911
Bacillota
GAT
Ile
>WENV182263086
OHTO01008535
144610
Bacillota
GTG
His
>WENV182263131
OHTO01014759
411547
Bacillota
CTG
Gln
>WENV182262935
OHTO01000769
248683
Bacillota
TTT
Lys
>WENV182263091
OHTO01008831
235095
Bacillota
GGT
Thr
>WENV182263161
OHTO01021177
411549
Bacillota
TTG
Gln
>WENV182262949
OHTO01001134
245386
Bacillota
CCA
Trp
>WENV182263065
OHTO01006893
144621
Bacillota
GTT
Asn
>WENV182262972
OHTO01002112
243098
Bacillota
GGT
Thr
>WENV182263128
OHTO01014181
58712
Bacillota
CAG
Leu
>WENV182262950
OHTO01001222
272992
Bacillota
CTT
Lys
>WENV182262858
OHTO01000051
344240
Bacillota
GCC
Gly
>WENV182262965
OHTO01001729
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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