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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182263992
OHTU01000834
144612
Bacillota
TCT
Arg
>WENV182264318
OHTU01013348
156189
Bacillota
GAT
Ile
>WENV182264076
OHTU01001981
235098
Bacillota
GAC
Val
>WENV182264248
OHTU01007698
235098
Bacillota
GAC
Val
>WENV182264345
OHTU01015823
148239
Bacillota
TCT
Arg
>WENV182264106
OHTU01002698
44854
Bacillota
TGA
Ser
>WENV182264433
OHTU01025115
238910
Bacillota
CTT
Lys
>WENV182264279
OHTU01009444
338147
Bacillota
CTC
Glu
>WENV182264364
OHTU01016966
235150
Bacillota
TGC
Ala
>WENV182264347
OHTU01015823
340802
Bacillota
TTG
Gln
>WENV182264007
OHTU01000969
11034
Bacillota
GGA
Ser
>WENV182264441
OHTU01028189
247057
Bacillota
TGC
Ala
>WENV182264195
OHTU01004722
238151
Bacillota
>WENV182263818
OHTU01000018
274189
Bacillota
TGT
Thr
>WENV182263953
OHTU01000508
235079
Bacillota
GAA
Phe
>WENV182264473
OHTU01034462
257952
Bacillota
TGT
Thr
>WENV182264242
OHTU01007268
173314
Bacillota
GAT
Ile
>WENV182264122
OHTU01003085
338149
Bacillota
CTC
Glu
>WENV182264231
OHTU01006325
338149
Bacillota
CTC
Glu
>WENV182264035
OHTU01001254
245298
Bacillota
CGG
Pro
>WENV182264083
OHTU01002067
37269
Bacillota
TGA
Ser
>WENV182264453
OHTU01029243
37269
Bacillota
TGA
Ser
>WENV182264228
OHTU01006251
149024
Bacillota
GGT
Thr
>WENV182264017
OHTU01001071
28968
Bacillota
GGA
Ser
>WENV182263951
OHTU01000508
235078
Bacillota
TAC
Val
>WENV182264459
OHTU01030733
153911
Bacillota
GAT
Ile
>WENV182264166
OHTU01003982
100326
Bacillota
GTA
Tyr
>WENV182264346
OHTU01015823
144610
Bacillota
GTG
His
>WENV182264497
OHTU01041257
240017
Bacillota
GCC
Gly
>WENV182264034
OHTU01001254
411547
Bacillota
CTG
Gln
>WENV182264092
OHTU01002238
411547
Bacillota
CTG
Gln
>WENV182264204
OHTU01004975
411547
Bacillota
CTG
Gln
>WENV182264107
OHTU01002698
4624
Bacillota
GCT
Ser
>WENV182264040
OHTU01001376
248683
Bacillota
TTT
Lys
>WENV182264111
OHTU01002758
235095
Bacillota
GGT
Thr
>WENV182264358
OHTU01016839
185292
Bacillota
ACG
Arg
>WENV182263970
OHTU01000686
411549
Bacillota
TTG
Gln
>WENV182264112
OHTU01002804
148188
Bacillota
CCG
Arg
>WENV182264121
OHTU01003082
80612
Bacillota
GTA
Tyr
>WENV182264108
OHTU01002710
235124
Bacillota
TGG
Pro
>WENV182264024
OHTU01001148
338129
Bacillota
TGT
Thr
>WENV182264315
OHTU01012969
144583
Bacillota
ACG
Arg
>WENV182264078
OHTU01002035
247734
Bacillota
TGC
Ala
>WENV182264207
OHTU01005440
238974
Bacillota
GAA
Phe
>WENV182263922
OHTU01000323
144621
Bacillota
GTT
Asn
>WENV182264123
OHTU01003085
144621
Bacillota
GTT
Asn
>WENV182264232
OHTU01006325
144621
Bacillota
GTT
Asn
>WENV182263931
OHTU01000352
58712
Bacillota
CAG
Leu
>WENV182264150
OHTU01003235
58712
Bacillota
CAG
Leu
>WENV182264178
OHTU01004384
245296
Bacillota
CCC
Gly
>WENV182263981
OHTU01000738
344240
Bacillota
GCC
Gly
>WENV182264156
OHTU01003654
144594
Bacillota
CAC
Val
>WENV182264366
OHTU01017262
95563
Bacillota
GTA
Tyr
>WENV182263839
OHTU01000045
338127
Bacillota
TTG
Gln
>WENV182264181
OHTU01004427
272488
Bacillota
GAA
Phe
>WENV182264222
OHTU01005970
238945
Bacillota
GCC
Gly
>WENV182263822
OHTU01000022
338128
Bacillota
TTC
Glu
>WENV182264067
OHTU01001866
338128
Bacillota
TTC
Glu
>WENV182263958
OHTU01000515
245344
Bacillota
GAA
Phe
>WENV182264449
OHTU01028520
150669
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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