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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182273903
OHUJ01011676
144612
Bacillota
TCT
Arg
>WENV182273603
OHUJ01001703
235693
Bacillota
GGT
Thr
>WENV182273227
OHUJ01000001
235134
Bacillota
GAA
Phe
>WENV182273885
OHUJ01011090
235134
Bacillota
GAA
Phe
>WENV182273448
OHUJ01000512
246392
Bacillota
GTT
Asn
>WENV182273328
OHUJ01000116
148239
Bacillota
TCT
Arg
>WENV182273942
OHUJ01014701
238489
Bacillota
GTC
Asp
>WENV182273400
OHUJ01000288
37549
Bacillota
TAA
Leu
>WENV182274032
OHUJ01024754
144577
Bacillota
GAT
Ile
>WENV182273496
OHUJ01000832
59312
Bacillota
CAG
Leu
>WENV182274038
OHUJ01025673
59312
Bacillota
CAG
Leu
>WENV182273766
OHUJ01004802
238910
Bacillota
CTT
Lys
>WENV182273623
OHUJ01001942
338147
Bacillota
CTC
Glu
>WENV182274056
OHUJ01028456
235150
Bacillota
TGC
Ala
>WENV182273409
OHUJ01000311
152047
Bacillota
GGG
Pro
>WENV182273637
OHUJ01002127
16820
Bacillota
GCT
Ser
>WENV182273366
OHUJ01000195
152512
Bacillota
CCT
Arg
>WENV182273554
OHUJ01001249
152459
Bacillota
GTC
Asp
>WENV182273941
OHUJ01014701
237265
Bacillota
TAC
Val
>WENV182274080
OHUJ01033043
235091
Bacillota
CTT
Lys
>WENV182274041
OHUJ01026695
44859
Bacillota
AAG
Leu
>WENV182273975
OHUJ01017516
11034
Bacillota
GGA
Ser
>WENV182273552
OHUJ01001218
10943
Bacillota
GGA
Ser
>WENV182273943
OHUJ01014701
238151
Bacillota
>WENV182273329
OHUJ01000116
156937
Bacillota
GTG
His
>WENV182274073
OHUJ01032148
247747
Bacillota
GGT
Thr
>WENV182273631
OHUJ01002100
342736
Bacillota
TTG
Gln
>WENV182273544
OHUJ01001181
235079
Bacillota
GAA
Phe
>WENV182273398
OHUJ01000288
340265
Bacillota
GCC
Gly
>WENV182273447
OHUJ01000512
340265
Bacillota
GCC
Gly
>WENV182273944
OHUJ01014701
80836
Bacillota
GTA
Tyr
>WENV182274031
OHUJ01024754
235087
Bacillota
TGC
Ala
>WENV182273413
OHUJ01000327
152513
Bacillota
GAC
Val
>WENV182274079
OHUJ01033043
338149
Bacillota
CTC
Glu
>WENV182273750
OHUJ01004159
245298
Bacillota
CGG
Pro
>WENV182274087
OHUJ01033424
147741
Bacillota
TCT
Arg
>WENV182273539
OHUJ01001150
37551
Bacillota
CGA
Ser
>WENV182273556
OHUJ01001249
81644
Bacillota
GAG
Leu
>WENV182274107
OHUJ01037223
413152
Bacillota
TCC
Gly
>WENV182273755
OHUJ01004227
152149
Bacillota
GTG
His
>WENV182273946
OHUJ01014701
237266
Bacillota
GTG
His
>WENV182274053
OHUJ01028066
152492
Bacillota
GGG
Pro
>WENV182273225
OHUJ01000001
235078
Bacillota
TAC
Val
>WENV182273907
OHUJ01011695
153911
Bacillota
GAT
Ile
>WENV182273551
OHUJ01001218
148268
Bacillota
CGG
Pro
>WENV182274011
OHUJ01023453
144610
Bacillota
GTG
His
>WENV182273228
OHUJ01000001
240017
Bacillota
GCC
Gly
>WENV182273749
OHUJ01004159
411547
Bacillota
CTG
Gln
>WENV182273926
OHUJ01013481
147684
Bacillota
ACG
Arg
>WENV182273870
OHUJ01010026
4624
Bacillota
GCT
Ser
>WENV182274147
OHUJ01043469
412387
Bacillota
GCA
Cys
>WENV182273305
OHUJ01000083
248683
Bacillota
TTT
Lys
>WENV182273450
OHUJ01000512
248683
Bacillota
TTT
Lys
>WENV182274036
OHUJ01025532
235095
Bacillota
GGT
Thr
>WENV182273449
OHUJ01000512
344183
Bacillota
CTG
Gln
>WENV182273812
OHUJ01006494
241471
Bacillota
TGC
Ala
>WENV182273452
OHUJ01000512
239079
Bacillota
TAC
Val
>WENV182273834
OHUJ01007917
411549
Bacillota
TTG
Gln
>WENV182273604
OHUJ01001703
152045
Bacillota
CAT
Met
>WENV182273451
OHUJ01000512
243398
Bacillota
TTC
Glu
>WENV182273471
OHUJ01000673
37588
Bacillota
TGA
Ser
>WENV182273677
OHUJ01002760
148188
Bacillota
CCG
Arg
>WENV182273562
OHUJ01001272
152046
Bacillota
TCT
Arg
>WENV182274078
OHUJ01032989
80612
Bacillota
GTA
Tyr
>WENV182273475
OHUJ01000734
152051
Bacillota
ACG
Arg
>WENV182273368
OHUJ01000207
243401
Bacillota
CGT
Thr
>WENV182273430
OHUJ01000403
249522
Bacillota
TAC
Val
>WENV182273519
OHUJ01001010
249522
Bacillota
TAC
Val
>WENV182273756
OHUJ01004475
235124
Bacillota
TGG
Pro
>WENV182273711
OHUJ01003319
144583
Bacillota
ACG
Arg
>WENV182274122
OHUJ01040332
144652
Bacillota
GTC
Asp
>WENV182273924
OHUJ01013368
247734
Bacillota
TGC
Ala
>WENV182273784
OHUJ01005541
238974
Bacillota
GAA
Phe
>WENV182274024
OHUJ01024213
238974
Bacillota
GAA
Phe
>WENV182273624
OHUJ01001956
144621
Bacillota
GTT
Asn
>WENV182274064
OHUJ01030876
235113
Bacillota
GAA
Phe
>WENV182273487
OHUJ01000795
243098
Bacillota
GGT
Thr
>WENV182273788
OHUJ01005662
58712
Bacillota
CAG
Leu
>WENV182273820
OHUJ01007171
245296
Bacillota
CCC
Gly
>WENV182273776
OHUJ01005197
344240
Bacillota
GCC
Gly
>WENV182273681
OHUJ01002830
144594
Bacillota
CAC
Val
>WENV182273259
OHUJ01000025
338127
Bacillota
TTG
Gln
>WENV182273945
OHUJ01014701
412118
Bacillota
>WENV182273928
OHUJ01013634
45160
Bacillota
CAA
Leu
>WENV182273453
OHUJ01000521
238945
Bacillota
GCC
Gly
>WENV182273505
OHUJ01000927
338128
Bacillota
TTC
Glu
>WENV182273616
OHUJ01001924
338128
Bacillota
TTC
Glu
>WENV182273394
OHUJ01000272
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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